RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 C20orf194Q5TEA3 1177 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP11-212ENST00000497179 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
USP11-212ENST00000497179 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
USP11-212ENST00000497179 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
USP11-212ENST00000497179 CSF1RP07333 972 aa18.17■□□□□ 0.5
USP11-212ENST00000497179 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
USP11-212ENST00000497179 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
USP11-212ENST00000497179 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
USP11-212ENST00000497179 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
USP11-212ENST00000497179 ALDH1B1P30837 517 aa18.16■□□□□ 0.5
USP11-212ENST00000497179 DALRD3Q5D0E6 543 aaKnown RBP18.16■□□□□ 0.5
USP11-212ENST00000497179 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
USP11-212ENST00000497179 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
USP11-212ENST00000497179 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
USP11-212ENST00000497179 COL4A1P02462 1669 aa18.15■□□□□ 0.5
USP11-212ENST00000497179 RABL6Q3YEC7 729 aaPredicted RBP18.15■□□□□ 0.5
USP11-212ENST00000497179 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
USP11-212ENST00000497179 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
USP11-212ENST00000497179 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
USP11-212ENST00000497179 CACNA1SQ13698 1873 aa18.15■□□□□ 0.5
USP11-212ENST00000497179 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
USP11-212ENST00000497179 GRAPQ13588 217 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 FAM161AQ3B820 660 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
USP11-212ENST00000497179 CCDC85AQ96PX6 553 aaPredicted RBP18.14■□□□□ 0.49
USP11-212ENST00000497179 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
USP11-212ENST00000497179 GREM2Q9H772 168 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
USP11-212ENST00000497179 LRRC37AA6NMS7 1700 aa18.13■□□□□ 0.49
USP11-212ENST00000497179 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
USP11-212ENST00000497179 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
USP11-212ENST00000497179 GNAI2P04899 355 aa18.12■□□□□ 0.49
USP11-212ENST00000497179 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
USP11-212ENST00000497179 SUPT16HQ9Y5B9 1047 aaKnown RBP18.12■□□□□ 0.49
USP11-212ENST00000497179 TAF1P21675 1872 aa18.12■□□□□ 0.49
USP11-212ENST00000497179 PPEF1O14829 653 aaPredicted RBP18.11■□□□□ 0.49
USP11-212ENST00000497179 BBOX1O75936 387 aa18.11■□□□□ 0.49
USP11-212ENST00000497179 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
USP11-212ENST00000497179 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
USP11-212ENST00000497179 CDC5LQ99459 802 aaKnown RBP18.11■□□□□ 0.49
USP11-212ENST00000497179 ITGA6P23229 1130 aa18.1■□□□□ 0.49
USP11-212ENST00000497179 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
USP11-212ENST00000497179 C7orf43Q8WVR3 580 aa18.1■□□□□ 0.49
USP11-212ENST00000497179 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
USP11-212ENST00000497179 CHMP3Q9Y3E7 222 aa18.1■□□□□ 0.49
USP11-212ENST00000497179 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
USP11-212ENST00000497179 ANKRD18BA2A2Z9 1011 aa18.09■□□□□ 0.49
USP11-212ENST00000497179 RPS8P62241 208 aaKnown RBP18.09■□□□□ 0.49
USP11-212ENST00000497179 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
USP11-212ENST00000497179 MTX1Q13505 466 aa18.09■□□□□ 0.49
USP11-212ENST00000497179 GPR162Q16538 588 aa18.09■□□□□ 0.49
USP11-212ENST00000497179 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
USP11-212ENST00000497179 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 C21orf2O43822 256 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 CCDC57Q2TAC2 916 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 ANKRD18AQ8IVF6 992 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
USP11-212ENST00000497179 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
USP11-212ENST00000497179 CC2D2BQ6DHV5 1058 aa18.07■□□□□ 0.48
USP11-212ENST00000497179 SP8Q8IXZ3 490 aa18.07■□□□□ 0.48
USP11-212ENST00000497179 C1orf115Q9H7X2 142 aa18.07■□□□□ 0.48
USP11-212ENST00000497179 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
USP11-212ENST00000497179 GRIN3BO60391 1043 aa18.06■□□□□ 0.48
USP11-212ENST00000497179 IGHMBP2P38935 993 aaKnown RBP18.06■□□□□ 0.48
USP11-212ENST00000497179 RFX5P48382 616 aaPredicted RBP18.06■□□□□ 0.48
USP11-212ENST00000497179 CCDC93Q567U6 631 aa18.06■□□□□ 0.48
USP11-212ENST00000497179 SLC51AQ86UW1 340 aa18.06■□□□□ 0.48
USP11-212ENST00000497179 CRBNQ96SW2 442 aa18.06■□□□□ 0.48
USP11-212ENST00000497179 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
USP11-212ENST00000497179 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
USP11-212ENST00000497179 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
USP11-212ENST00000497179 BSDC1Q9NW68 430 aaPredicted RBP18.05■□□□□ 0.48
USP11-212ENST00000497179 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
USP11-212ENST00000497179 GRIPAP1Q4V328 841 aa18.04■□□□□ 0.48
USP11-212ENST00000497179 TAF7LQ5H9L4 462 aa18.04■□□□□ 0.48
USP11-212ENST00000497179 ZNF594Q96JF6 807 aaPredicted RBP18.04■□□□□ 0.48
USP11-212ENST00000497179 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
USP11-212ENST00000497179 DUOX1Q9NRD9 1551 aa18.04■□□□□ 0.48
USP11-212ENST00000497179 NFKBIEO00221 500 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
USP11-212ENST00000497179 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 RTKN2Q8IZC4 609 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 MPHOSPH8Q99549 860 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 A0A1B0GUL6 1792 aa18.03■□□□□ 0.48
USP11-212ENST00000497179 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
USP11-212ENST00000497179 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
USP11-212ENST00000497179 ARHGAP27Q6ZUM4 889 aa18.02■□□□□ 0.48
USP11-212ENST00000497179 UTRNP46939 3433 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms