RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
ACTN4-207ENST00000495553 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 ZBTB40Q9NUA8 1239 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 RIC1Q4ADV7 1423 aa11.85□□□□□ -0.51
ACTN4-207ENST00000495553 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
ACTN4-207ENST00000495553 HMMRO75330 724 aa11.84□□□□□ -0.51
ACTN4-207ENST00000495553 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
ACTN4-207ENST00000495553 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
ACTN4-207ENST00000495553 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
ACTN4-207ENST00000495553 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-207ENST00000495553 MEIS3Q99687 375 aa11.84□□□□□ -0.51
ACTN4-207ENST00000495553 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
ACTN4-207ENST00000495553 NUP98P52948 1817 aa11.83□□□□□ -0.51
ACTN4-207ENST00000495553 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
ACTN4-207ENST00000495553 HOXA10P31260 410 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-207ENST00000495553 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
ACTN4-207ENST00000495553 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-207ENST00000495553 TMX4Q9H1E5 349 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-207ENST00000495553 RWDD1Q9H446 243 aaPredicted RBP11.83□□□□□ -0.52
ACTN4-207ENST00000495553 UTYO14607 1347 aa11.83□□□□□ -0.52
ACTN4-207ENST00000495553 H7C1W4 665 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 C21orf2O43822 256 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 PDE8AO60658 829 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
ACTN4-207ENST00000495553 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 CRAMP1Q96RY5 1269 aa11.82□□□□□ -0.52
ACTN4-207ENST00000495553 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
ACTN4-207ENST00000495553 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
ACTN4-207ENST00000495553 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
ACTN4-207ENST00000495553 LRRFIP2Q9Y608 721 aaKnown RBP11.81□□□□□ -0.52
ACTN4-207ENST00000495553 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
ACTN4-207ENST00000495553 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
ACTN4-207ENST00000495553 BBOX1O75936 387 aa11.8□□□□□ -0.52
ACTN4-207ENST00000495553 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
ACTN4-207ENST00000495553 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
ACTN4-207ENST00000495553 CTSWP56202 376 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 GRAPQ13588 217 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 ANKRD44Q8N8A2 993 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
ACTN4-207ENST00000495553 CCDC85AQ96PX6 553 aaPredicted RBP11.79□□□□□ -0.52
ACTN4-207ENST00000495553 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
ACTN4-207ENST00000495553 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 YY1P25490 414 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 CASP7P55210 303 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 HDAC1Q13547 482 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-207ENST00000495553 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 CENPQQ7L2Z9 268 aaPredicted RBP11.78□□□□□ -0.52
ACTN4-207ENST00000495553 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
ACTN4-207ENST00000495553 BICC1Q9H694 974 aaKnown RBP11.78□□□□□ -0.52
ACTN4-207ENST00000495553 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
ACTN4-207ENST00000495553 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.53
ACTN4-207ENST00000495553 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 OLFM4Q6UX06 510 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 TMC4Q7Z404 712 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
ACTN4-207ENST00000495553 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 ATP6V0A2Q9Y487 856 aa11.77□□□□□ -0.53
ACTN4-207ENST00000495553 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 NFKBIEO00221 500 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 LMNB1P20700 586 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 RASSF7Q02833 373 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 IFIT5Q13325 482 aaKnown RBP11.76□□□□□ -0.53
ACTN4-207ENST00000495553 MTX1Q13505 466 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 CELF1Q92879 486 aaKnown RBP11.76□□□□□ -0.53
ACTN4-207ENST00000495553 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 GREM2Q9H772 168 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
ACTN4-207ENST00000495553 TNRC6CQ9HCJ0 1690 aaKnown RBP11.75□□□□□ -0.53
ACTN4-207ENST00000495553 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 CSF1RP07333 972 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
ACTN4-207ENST00000495553 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
ACTN4-207ENST00000495553 RABL6Q3YEC7 729 aaPredicted RBP11.75□□□□□ -0.53
ACTN4-207ENST00000495553 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 RNF181Q9P0P0 153 aa11.75□□□□□ -0.53
ACTN4-207ENST00000495553 ITGA6P23229 1130 aa11.74□□□□□ -0.53
ACTN4-207ENST00000495553 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
ACTN4-207ENST00000495553 FOXO4P98177 505 aa11.74□□□□□ -0.53
ACTN4-207ENST00000495553 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
ACTN4-207ENST00000495553 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
ACTN4-207ENST00000495553 SSH3Q8TE77 659 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms