RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PCCAP05165 728 aaPredicted RBP22.34■■□□□ 1.17
SEC13-218ENST00000490283 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
SEC13-218ENST00000490283 MPNDQ8N594 471 aa22.34■■□□□ 1.17
SEC13-218ENST00000490283 VPS33BQ9H267 617 aa22.34■■□□□ 1.17
SEC13-218ENST00000490283 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
SEC13-218ENST00000490283 FZD9O00144 591 aa22.33■■□□□ 1.17
SEC13-218ENST00000490283 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
SEC13-218ENST00000490283 NIM1KQ8IY84 436 aa22.33■■□□□ 1.17
SEC13-218ENST00000490283 FLIIQ13045 1269 aa22.32■■□□□ 1.16
SEC13-218ENST00000490283 L3MBTL3Q96JM7 780 aaPredicted RBP22.32■■□□□ 1.16
SEC13-218ENST00000490283 LAMB2P55268 1798 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 POTECB2RU33 542 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 PDE8AO60658 829 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 VAMP4O75379 141 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
SEC13-218ENST00000490283 CCDC152Q4G0S7 254 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 GPC2Q8N158 579 aa22.31■■□□□ 1.16
SEC13-218ENST00000490283 G2E3Q7L622 706 aa22.3■■□□□ 1.16
SEC13-218ENST00000490283 RTFDC1Q9BY42 306 aaPredicted RBP22.3■■□□□ 1.16
SEC13-218ENST00000490283 DDX60Q8IY21 1712 aaKnown RBP22.29■■□□□ 1.16
SEC13-218ENST00000490283 AOC3Q16853 763 aa22.29■■□□□ 1.16
SEC13-218ENST00000490283 SLC51AQ86UW1 340 aa22.29■■□□□ 1.16
SEC13-218ENST00000490283 HACL1Q9UJ83 578 aa22.29■■□□□ 1.16
SEC13-218ENST00000490283 CELF1Q92879 486 aaKnown RBP22.28■■□□□ 1.16
SEC13-218ENST00000490283 SPINK5Q9NQ38 1064 aaPredicted RBP22.28■■□□□ 1.16
SEC13-218ENST00000490283 GJA3Q9Y6H8 435 aa22.28■■□□□ 1.16
SEC13-218ENST00000490283 CDHR2Q9BYE9 1310 aa22.28■■□□□ 1.16
SEC13-218ENST00000490283 IGKV5-2P06315 115 aa22.27■■□□□ 1.16
SEC13-218ENST00000490283 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
SEC13-218ENST00000490283 RPS8P62241 208 aaKnown RBP22.27■■□□□ 1.16
SEC13-218ENST00000490283 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.16
SEC13-218ENST00000490283 NEURL1BA8MQ27 555 aa22.26■■□□□ 1.15
SEC13-218ENST00000490283 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
SEC13-218ENST00000490283 CWF19L2Q2TBE0 894 aaKnown RBP22.26■■□□□ 1.15
SEC13-218ENST00000490283 CHADLQ6NUI6 762 aa22.26■■□□□ 1.15
SEC13-218ENST00000490283 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
SEC13-218ENST00000490283 TAF1DQ9H5J8 278 aaPredicted RBP22.26■■□□□ 1.15
SEC13-218ENST00000490283 NSFL1CQ9UNZ2 370 aaKnown RBP22.26■■□□□ 1.15
SEC13-218ENST00000490283 KIAA2012Q0VF49 1180 aa22.25■■□□□ 1.15
SEC13-218ENST00000490283 EAPPQ56P03 285 aaPredicted RBP22.25■■□□□ 1.15
SEC13-218ENST00000490283 ZNRF3Q9ULT6 936 aa22.25■■□□□ 1.15
SEC13-218ENST00000490283 EPHX2P34913 555 aa22.24■■□□□ 1.15
SEC13-218ENST00000490283 PNMA8AQ86V59 439 aaPredicted RBP22.24■■□□□ 1.15
SEC13-218ENST00000490283 LDHDQ86WU2 507 aa22.24■■□□□ 1.15
SEC13-218ENST00000490283 ZNF521Q96K83 1311 aa22.24■■□□□ 1.15
SEC13-218ENST00000490283 E9PSI1 815 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 C6orf229H3BNL8 230 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 CTSWP56202 376 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 LINS1Q8NG48 757 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
SEC13-218ENST00000490283 CDC5LQ99459 802 aaKnown RBP22.23■■□□□ 1.15
SEC13-218ENST00000490283 EYA3Q99504 573 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
SEC13-218ENST00000490283 SCN4AP35499 1836 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 WASHC4Q2M389 1173 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 CLEC11AQ9Y240 323 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 COL4A5P29400 1685 aa22.22■■□□□ 1.15
SEC13-218ENST00000490283 GCKRQ14397 625 aa22.21■■□□□ 1.15
SEC13-218ENST00000490283 ANKIB1Q9P2G1 1089 aa22.21■■□□□ 1.15
SEC13-218ENST00000490283 POTEIP0CG38 1075 aa22.2■■□□□ 1.14
SEC13-218ENST00000490283 POTEJP0CG39 1038 aa22.2■■□□□ 1.14
SEC13-218ENST00000490283 GPSM2P81274 684 aa22.2■■□□□ 1.14
SEC13-218ENST00000490283 TNIP1Q15025 636 aa22.2■■□□□ 1.14
SEC13-218ENST00000490283 LRRC37AA6NMS7 1700 aa22.2■■□□□ 1.14
SEC13-218ENST00000490283 H7C1W4 665 aa22.19■■□□□ 1.14
SEC13-218ENST00000490283 CIAPIN1Q6FI81 312 aa22.19■■□□□ 1.14
SEC13-218ENST00000490283 CXCL9Q07325 125 aa22.18■■□□□ 1.14
SEC13-218ENST00000490283 TTLL11Q8NHH1 800 aa22.18■■□□□ 1.14
SEC13-218ENST00000490283 CACNA1FO60840 1977 aa22.18■■□□□ 1.14
SEC13-218ENST00000490283 TAF1P21675 1872 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 F6X3S4 739 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 G3V3G9 751 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 RIMBP2O15034 1052 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 DCAF8Q5TAQ9 597 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 BCL2L13Q9BXK5 485 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
SEC13-218ENST00000490283 PODXL2Q9NZ53 605 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 POLLQ9UGP5 575 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 GGA1Q9UJY5 639 aa22.17■■□□□ 1.14
SEC13-218ENST00000490283 RTL9Q8NET4 1388 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 RAD17O75943 681 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 UFL1O94874 794 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 SCNN1DP51172 638 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 HTRA3P83110 453 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 TBC1D16Q8TBP0 767 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 PLA2G12BQ9BX93 195 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 GREM2Q9H772 168 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 DUOX1Q9NRD9 1551 aa22.16■■□□□ 1.14
SEC13-218ENST00000490283 XDHP47989 1333 aa22.15■■□□□ 1.14
SEC13-218ENST00000490283 IGHMBP2P38935 993 aaKnown RBP22.15■■□□□ 1.14
SEC13-218ENST00000490283 EPS15P42566 896 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 SLFN5Q08AF3 891 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 BEND3Q5T5X7 828 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 SLC4A10Q6U841 1118 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 USP50Q70EL3 339 aaPredicted RBP22.14■■□□□ 1.13
SEC13-218ENST00000490283 DNAJC5GQ8N7S2 189 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 KLRG1Q96E93 195 aa22.14■■□□□ 1.13
SEC13-218ENST00000490283 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms