RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 PDE8AO60658 829 aa24.2■■□□□ 1.46
HDAC10-215ENST00000488270 IARSP41252 1262 aaKnown RBP24.2■■□□□ 1.46
HDAC10-215ENST00000488270 CACNA1SQ13698 1873 aa24.19■■□□□ 1.46
HDAC10-215ENST00000488270 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
HDAC10-215ENST00000488270 CASP7P55210 303 aa24.19■■□□□ 1.46
HDAC10-215ENST00000488270 GCKRQ14397 625 aa24.19■■□□□ 1.46
HDAC10-215ENST00000488270 LINS1Q8NG48 757 aa24.19■■□□□ 1.46
HDAC10-215ENST00000488270 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
HDAC10-215ENST00000488270 DDX60Q8IY21 1712 aaKnown RBP24.18■■□□□ 1.46
HDAC10-215ENST00000488270 BEND3Q5T5X7 828 aa24.18■■□□□ 1.46
HDAC10-215ENST00000488270 MRPL50Q8N5N7 158 aaKnown RBP24.18■■□□□ 1.46
HDAC10-215ENST00000488270 LAMB2P55268 1798 aa24.17■■□□□ 1.46
HDAC10-215ENST00000488270 HSP90B1P14625 803 aaKnown RBP24.17■■□□□ 1.46
HDAC10-215ENST00000488270 SEC31BQ9NQW1 1179 aa24.17■■□□□ 1.46
HDAC10-215ENST00000488270 COL4A1P02462 1669 aa24.17■■□□□ 1.46
HDAC10-215ENST00000488270 FZD9O00144 591 aa24.16■■□□□ 1.46
HDAC10-215ENST00000488270 RPS8P62241 208 aaKnown RBP24.16■■□□□ 1.46
HDAC10-215ENST00000488270 DPY19L2Q6NUT2 758 aa24.16■■□□□ 1.46
HDAC10-215ENST00000488270 SSH1Q8WYL5 1049 aa24.16■■□□□ 1.46
HDAC10-215ENST00000488270 TOMM70O94826 608 aa24.15■■□□□ 1.46
HDAC10-215ENST00000488270 DDNO94850 711 aaPredicted RBP24.15■■□□□ 1.46
HDAC10-215ENST00000488270 UBE3BQ7Z3V4 1068 aa24.15■■□□□ 1.46
HDAC10-215ENST00000488270 TMC4Q7Z404 712 aa24.15■■□□□ 1.46
HDAC10-215ENST00000488270 TTLL11Q8NHH1 800 aa24.15■■□□□ 1.46
HDAC10-215ENST00000488270 COL4A5P29400 1685 aa24.15■■□□□ 1.46
HDAC10-215ENST00000488270 CCDC152Q4G0S7 254 aa24.14■■□□□ 1.45
HDAC10-215ENST00000488270 ZNF541Q9H0D2 1346 aa24.13■■□□□ 1.45
HDAC10-215ENST00000488270 VEGFAP15692 232 aaPredicted RBP24.13■■□□□ 1.45
HDAC10-215ENST00000488270 CTSWP56202 376 aa24.13■■□□□ 1.45
HDAC10-215ENST00000488270 MPNDQ8N594 471 aa24.13■■□□□ 1.45
HDAC10-215ENST00000488270 CCDC85AQ96PX6 553 aaPredicted RBP24.13■■□□□ 1.45
HDAC10-215ENST00000488270 PLA2G12BQ9BX93 195 aa24.13■■□□□ 1.45
HDAC10-215ENST00000488270 CCDC88AQ3V6T2 1871 aa24.13■■□□□ 1.45
HDAC10-215ENST00000488270 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
HDAC10-215ENST00000488270 TMX4Q9H1E5 349 aaPredicted RBP24.12■■□□□ 1.45
HDAC10-215ENST00000488270 VPS33BQ9H267 617 aa24.12■■□□□ 1.45
HDAC10-215ENST00000488270 TIAM2Q8IVF5 1701 aa24.1■■□□□ 1.45
HDAC10-215ENST00000488270 DICER1Q9UPY3 1922 aaKnown RBP24.1■■□□□ 1.45
HDAC10-215ENST00000488270 GPSM2P81274 684 aa24.1■■□□□ 1.45
HDAC10-215ENST00000488270 AOC3Q16853 763 aa24.1■■□□□ 1.45
HDAC10-215ENST00000488270 LARGE2Q8N3Y3 721 aa24.1■■□□□ 1.45
HDAC10-215ENST00000488270 L3MBTL3Q96JM7 780 aaPredicted RBP24.1■■□□□ 1.45
HDAC10-215ENST00000488270 GREM2Q9H772 168 aa24.1■■□□□ 1.45
HDAC10-215ENST00000488270 TAF1P21675 1872 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 PPIP5K2O43314 1243 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 CSF1RP07333 972 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 SUPT20HQ8NEM7 779 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 RBM46Q8TBY0 533 aaKnown RBP24.09■■□□□ 1.45
HDAC10-215ENST00000488270 JDP2Q8WYK2 163 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
HDAC10-215ENST00000488270 RTL9Q8NET4 1388 aa24.08■■□□□ 1.45
HDAC10-215ENST00000488270 KIAA2012Q0VF49 1180 aa24.08■■□□□ 1.45
HDAC10-215ENST00000488270 ALDH1L2Q3SY69 923 aa24.08■■□□□ 1.45
HDAC10-215ENST00000488270 POLLQ9UGP5 575 aa24.08■■□□□ 1.45
HDAC10-215ENST00000488270 NSFL1CQ9UNZ2 370 aaKnown RBP24.08■■□□□ 1.45
HDAC10-215ENST00000488270 CACNA1FO60840 1977 aa24.08■■□□□ 1.45
HDAC10-215ENST00000488270 CEP350Q5VT06 3117 aa24.08■■□□□ 1.44
HDAC10-215ENST00000488270 CT47B1P0C2W7 299 aaPredicted RBP24.07■■□□□ 1.44
HDAC10-215ENST00000488270 FOXO4P98177 505 aa24.07■■□□□ 1.44
HDAC10-215ENST00000488270 ALDH1L1O75891 902 aa24.06■■□□□ 1.44
HDAC10-215ENST00000488270 PODXL2Q9NZ53 605 aa24.06■■□□□ 1.44
HDAC10-215ENST00000488270 DUOX1Q9NRD9 1551 aa24.06■■□□□ 1.44
HDAC10-215ENST00000488270 WDR90Q96KV7 1748 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 SLC4A10Q6U841 1118 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 ANKRD18AQ8IVF6 992 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
HDAC10-215ENST00000488270 GPC2Q8N158 579 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 SRCIN1Q9C0H9 1055 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 PTPRCP08575 1304 aa24.05■■□□□ 1.44
HDAC10-215ENST00000488270 GRM8O00222 908 aa24.04■■□□□ 1.44
HDAC10-215ENST00000488270 EPHA10Q5JZY3 1008 aa24.04■■□□□ 1.44
HDAC10-215ENST00000488270 NIM1KQ8IY84 436 aa24.04■■□□□ 1.44
HDAC10-215ENST00000488270 TBC1D16Q8TBP0 767 aa24.04■■□□□ 1.44
HDAC10-215ENST00000488270 ZNRF3Q9ULT6 936 aa24.04■■□□□ 1.44
HDAC10-215ENST00000488270 BRPF1P55201 1214 aaPredicted RBP24.03■■□□□ 1.44
HDAC10-215ENST00000488270 HNRNPUQ00839 825 aaKnown RBP eCLIP24.03■■□□□ 1.44
HDAC10-215ENST00000488270 BSDC1Q9NW68 430 aaPredicted RBP24.03■■□□□ 1.44
HDAC10-215ENST00000488270 LRRC37AA6NMS7 1700 aa24.03■■□□□ 1.44
HDAC10-215ENST00000488270 HSPA6P17066 643 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 RARSP54136 660 aaKnown RBP24.02■■□□□ 1.44
HDAC10-215ENST00000488270 EIF6P56537 245 aaKnown RBP24.02■■□□□ 1.44
HDAC10-215ENST00000488270 CXCL9Q07325 125 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 FSTL1Q12841 308 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 FAM161AQ3B820 660 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 KAZALD1Q96I82 304 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 CDC5LQ99459 802 aaKnown RBP24.02■■□□□ 1.44
HDAC10-215ENST00000488270 TAF1DQ9H5J8 278 aaPredicted RBP24.02■■□□□ 1.44
HDAC10-215ENST00000488270 SMC4Q9NTJ3 1288 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 MINPP1Q9UNW1 487 aa24.02■■□□□ 1.44
HDAC10-215ENST00000488270 WTIPA6NIX2 430 aaPredicted RBP24.01■■□□□ 1.43
HDAC10-215ENST00000488270 YDJCA8MPS7 323 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 POTEIP0CG38 1075 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 POTEJP0CG39 1038 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 ITGA6P23229 1130 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 WASHC4Q2M389 1173 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 GPR101Q96P66 508 aaPredicted RBP24.01■■□□□ 1.43
HDAC10-215ENST00000488270 UTYO14607 1347 aa24.01■■□□□ 1.43
HDAC10-215ENST00000488270 C6orf229H3BNL8 230 aa24■■□□□ 1.43
HDAC10-215ENST00000488270 NBPF7P0C2Y1 421 aaPredicted RBP23.99■■□□□ 1.43
HDAC10-215ENST00000488270 C9orf78Q9NZ63 289 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms