RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KAZALD1Q96I82 304 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 SUCLG2Q96I99 432 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 CRAMP1Q96RY5 1269 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 MEIS3Q99687 375 aa24.37■■□□□ 1.49
PCOLCE-208ENST00000487172 ZBTB7BO15156 539 aaPredicted RBP24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 UBTFL1P0CB47 393 aaPredicted RBP24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 CCDC152Q4G0S7 254 aa24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 ITPRIPQ8IWB1 547 aa24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 ZNF622Q969S3 477 aaKnown RBP eCLIP24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 RBM17Q96I25 401 aaKnown RBP24.36■■□□□ 1.49
PCOLCE-208ENST00000487172 MVPQ14764 893 aaKnown RBP24.35■■□□□ 1.49
PCOLCE-208ENST00000487172 C20orf194Q5TEA3 1177 aa24.35■■□□□ 1.49
PCOLCE-208ENST00000487172 RTL9Q8NET4 1388 aa24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 EPHA10Q5JZY3 1008 aa24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 TTLL6Q8N841 843 aa24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 DDX19BQ9UMR2 479 aa24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 COG6Q9Y2V7 657 aa24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 SUPT16HQ9Y5B9 1047 aaKnown RBP24.34■■□□□ 1.49
PCOLCE-208ENST00000487172 RABL6Q3YEC7 729 aaPredicted RBP24.33■■□□□ 1.49
PCOLCE-208ENST00000487172 DALRD3Q5D0E6 543 aaKnown RBP24.32■■□□□ 1.48
PCOLCE-208ENST00000487172 CHMP4BQ9H444 224 aaKnown RBP24.32■■□□□ 1.48
PCOLCE-208ENST00000487172 LMBR1LQ6UX01 489 aa24.31■■□□□ 1.48
PCOLCE-208ENST00000487172 BICC1Q9H694 974 aaKnown RBP24.31■■□□□ 1.48
PCOLCE-208ENST00000487172 GNAI2P04899 355 aa24.3■■□□□ 1.48
PCOLCE-208ENST00000487172 GRAPQ13588 217 aa24.3■■□□□ 1.48
PCOLCE-208ENST00000487172 GRAPLQ8TC17 118 aaPredicted RBP24.3■■□□□ 1.48
PCOLCE-208ENST00000487172 GREM2Q9H772 168 aa24.3■■□□□ 1.48
PCOLCE-208ENST00000487172 BBOX1O75936 387 aa24.29■■□□□ 1.48
PCOLCE-208ENST00000487172 ANKRD44Q8N8A2 993 aa24.29■■□□□ 1.48
PCOLCE-208ENST00000487172 LRRFIP2Q9Y608 721 aaKnown RBP24.29■■□□□ 1.48
PCOLCE-208ENST00000487172 SLX4Q8IY92 1834 aa24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 PRPF40BQ6NWY9 871 aaKnown RBP24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 CCDC85AQ96PX6 553 aaPredicted RBP24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 SEC31BQ9NQW1 1179 aa24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 BCS1LQ9Y276 419 aa24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 ARFGEF1Q9Y6D6 1849 aa24.28■■□□□ 1.48
PCOLCE-208ENST00000487172 CENPBP07199 599 aaPredicted RBP24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 ITGA6P23229 1130 aa24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 C7orf43Q8WVR3 580 aa24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 CELF1Q92879 486 aaKnown RBP24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 CDC5LQ99459 802 aaKnown RBP24.27■■□□□ 1.48
PCOLCE-208ENST00000487172 TAF1P21675 1872 aa24.26■■□□□ 1.47
PCOLCE-208ENST00000487172 CACNA1SQ13698 1873 aa24.26■■□□□ 1.47
PCOLCE-208ENST00000487172 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
PCOLCE-208ENST00000487172 FAM161AQ3B820 660 aa24.26■■□□□ 1.47
PCOLCE-208ENST00000487172 ZBTB40Q9NUA8 1239 aa24.26■■□□□ 1.47
PCOLCE-208ENST00000487172 ANKRD18BA2A2Z9 1011 aa24.25■■□□□ 1.47
PCOLCE-208ENST00000487172 IFIT5Q13325 482 aaKnown RBP24.25■■□□□ 1.47
PCOLCE-208ENST00000487172 MTX1Q13505 466 aa24.25■■□□□ 1.47
PCOLCE-208ENST00000487172 CCDC57Q2TAC2 916 aa24.25■■□□□ 1.47
PCOLCE-208ENST00000487172 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
PCOLCE-208ENST00000487172 ANKRD18AQ8IVF6 992 aa24.24■■□□□ 1.47
PCOLCE-208ENST00000487172 SP8Q8IXZ3 490 aa24.24■■□□□ 1.47
PCOLCE-208ENST00000487172 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
PCOLCE-208ENST00000487172 CHMP3Q9Y3E7 222 aa24.24■■□□□ 1.47
PCOLCE-208ENST00000487172 PPEF1O14829 653 aaPredicted RBP24.23■■□□□ 1.47
PCOLCE-208ENST00000487172 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.47
PCOLCE-208ENST00000487172 GPR162Q16538 588 aa24.23■■□□□ 1.47
PCOLCE-208ENST00000487172 SOGA3Q5TF21 947 aa24.23■■□□□ 1.47
PCOLCE-208ENST00000487172 ATP6V0A2Q9Y487 856 aa24.23■■□□□ 1.47
PCOLCE-208ENST00000487172 COL4A1P02462 1669 aa24.22■■□□□ 1.47
PCOLCE-208ENST00000487172 C21orf2O43822 256 aa24.21■■□□□ 1.47
PCOLCE-208ENST00000487172 GRIN3BO60391 1043 aa24.21■■□□□ 1.47
PCOLCE-208ENST00000487172 IGHMBP2P38935 993 aaKnown RBP24.21■■□□□ 1.47
PCOLCE-208ENST00000487172 GRIPAP1Q4V328 841 aa24.21■■□□□ 1.47
PCOLCE-208ENST00000487172 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
PCOLCE-208ENST00000487172 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
PCOLCE-208ENST00000487172 CRBNQ96SW2 442 aa24.2■■□□□ 1.46
PCOLCE-208ENST00000487172 DCAF8L1A6NGE4 600 aa24.19■■□□□ 1.46
PCOLCE-208ENST00000487172 RFX5P48382 616 aaPredicted RBP24.19■■□□□ 1.46
PCOLCE-208ENST00000487172 ATP8B2P98198 1209 aa24.19■■□□□ 1.46
PCOLCE-208ENST00000487172 TMX4Q9H1E5 349 aaPredicted RBP24.19■■□□□ 1.46
PCOLCE-208ENST00000487172 C1orf115Q9H7X2 142 aa24.19■■□□□ 1.46
PCOLCE-208ENST00000487172 CCDC93Q567U6 631 aa24.18■■□□□ 1.46
PCOLCE-208ENST00000487172 MPHOSPH8Q99549 860 aa24.18■■□□□ 1.46
PCOLCE-208ENST00000487172 ZNF219Q9P2Y4 722 aaPredicted RBP24.18■■□□□ 1.46
PCOLCE-208ENST00000487172 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
PCOLCE-208ENST00000487172 SRCAPQ6ZRS2 3230 aa24.18■■□□□ 1.46
PCOLCE-208ENST00000487172 SRGAP3O43295 1099 aa24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 AAMPQ13685 434 aa24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 TAF7LQ5H9L4 462 aa24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 RPAP2Q8IXW5 612 aaPredicted RBP24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 RTKN2Q8IZC4 609 aa24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 ZNF594Q96JF6 807 aaPredicted RBP24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 SNED1Q8TER0 1413 aa24.17■■□□□ 1.46
PCOLCE-208ENST00000487172 PTPN12Q05209 780 aaKnown RBP24.16■■□□□ 1.46
PCOLCE-208ENST00000487172 CEP85Q6P2H3 762 aa24.16■■□□□ 1.46
PCOLCE-208ENST00000487172 COPRSQ9NQ92 184 aa24.16■■□□□ 1.46
PCOLCE-208ENST00000487172 FBXO3Q9UK99 471 aa24.16■■□□□ 1.46
PCOLCE-208ENST00000487172 FER1L6Q2WGJ9 1857 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 PNMA6EA0A0J9YXQ4 647 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 POLA2Q14181 598 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 OLFM4Q6UX06 510 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 LDHAL6AQ6ZMR3 332 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 SSH3Q8TE77 659 aa24.15■■□□□ 1.46
PCOLCE-208ENST00000487172 MINPP1Q9UNW1 487 aa24.14■■□□□ 1.45
PCOLCE-208ENST00000487172 SPEF2Q9C093 1822 aa24.14■■□□□ 1.45
PCOLCE-208ENST00000487172 ARHGAP27Q6ZUM4 889 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms