RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 SMC1BQ8NDV3 1235 aa18.62■□□□□ 0.57
CLDN11-207ENST00000486975 ABCC4O15439 1325 aa18.61■□□□□ 0.57
CLDN11-207ENST00000486975 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
CLDN11-207ENST00000486975 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
CLDN11-207ENST00000486975 L3MBTL3Q96JM7 780 aaPredicted RBP18.61■□□□□ 0.57
CLDN11-207ENST00000486975 BBOX1O75936 387 aa18.6■□□□□ 0.57
CLDN11-207ENST00000486975 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
CLDN11-207ENST00000486975 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
CLDN11-207ENST00000486975 FZD9O00144 591 aa18.59■□□□□ 0.57
CLDN11-207ENST00000486975 DDNO94850 711 aaPredicted RBP18.59■□□□□ 0.57
CLDN11-207ENST00000486975 MNX1P50219 401 aaPredicted RBP18.59■□□□□ 0.57
CLDN11-207ENST00000486975 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
CLDN11-207ENST00000486975 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
CLDN11-207ENST00000486975 TSR2Q969E8 191 aaKnown RBP18.59■□□□□ 0.57
CLDN11-207ENST00000486975 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
CLDN11-207ENST00000486975 LAMB2P55268 1798 aa18.59■□□□□ 0.57
CLDN11-207ENST00000486975 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.56
CLDN11-207ENST00000486975 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
CLDN11-207ENST00000486975 VPS33BQ9H267 617 aa18.58■□□□□ 0.56
CLDN11-207ENST00000486975 IQCA1LA6NCM1 817 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
CLDN11-207ENST00000486975 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
CLDN11-207ENST00000486975 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
CLDN11-207ENST00000486975 TMC4Q7Z404 712 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 SP8Q8IXZ3 490 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 JDP2Q8WYK2 163 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
CLDN11-207ENST00000486975 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
CLDN11-207ENST00000486975 CEP350Q5VT06 3117 aa18.56■□□□□ 0.56
CLDN11-207ENST00000486975 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
CLDN11-207ENST00000486975 GRAPQ13588 217 aa18.56■□□□□ 0.56
CLDN11-207ENST00000486975 CCDC191Q8NCU4 936 aa18.56■□□□□ 0.56
CLDN11-207ENST00000486975 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
CLDN11-207ENST00000486975 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
CLDN11-207ENST00000486975 COL4A5P29400 1685 aa18.55■□□□□ 0.56
CLDN11-207ENST00000486975 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
CLDN11-207ENST00000486975 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
CLDN11-207ENST00000486975 ZNF579Q8NAF0 562 aaKnown RBP18.55■□□□□ 0.56
CLDN11-207ENST00000486975 ZBTB38Q8NAP3 1195 aaPredicted RBP18.55■□□□□ 0.56
CLDN11-207ENST00000486975 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
CLDN11-207ENST00000486975 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
CLDN11-207ENST00000486975 SCN4AP35499 1836 aa18.55■□□□□ 0.56
CLDN11-207ENST00000486975 TCERG1O14776 1098 aaKnown RBP18.54■□□□□ 0.56
CLDN11-207ENST00000486975 SLC51AQ86UW1 340 aa18.54■□□□□ 0.56
CLDN11-207ENST00000486975 GPC2Q8N158 579 aa18.54■□□□□ 0.56
CLDN11-207ENST00000486975 LARGE2Q8N3Y3 721 aa18.54■□□□□ 0.56
CLDN11-207ENST00000486975 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
CLDN11-207ENST00000486975 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
CLDN11-207ENST00000486975 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-207ENST00000486975 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
CLDN11-207ENST00000486975 DNAJC5GQ8N7S2 189 aa18.53■□□□□ 0.56
CLDN11-207ENST00000486975 MYD88Q99836 296 aa18.53■□□□□ 0.56
CLDN11-207ENST00000486975 TAF1DQ9H5J8 278 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-207ENST00000486975 LRRC37AA6NMS7 1700 aa18.52■□□□□ 0.56
CLDN11-207ENST00000486975 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-207ENST00000486975 EIF6P56537 245 aaKnown RBP18.52■□□□□ 0.56
CLDN11-207ENST00000486975 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-207ENST00000486975 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
CLDN11-207ENST00000486975 CLCN6P51797 869 aa18.51■□□□□ 0.55
CLDN11-207ENST00000486975 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
CLDN11-207ENST00000486975 MPNDQ8N594 471 aa18.51■□□□□ 0.55
CLDN11-207ENST00000486975 HACL1Q9UJ83 578 aa18.51■□□□□ 0.55
CLDN11-207ENST00000486975 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
CLDN11-207ENST00000486975 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
CLDN11-207ENST00000486975 LDHDQ86WU2 507 aa18.5■□□□□ 0.55
CLDN11-207ENST00000486975 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
CLDN11-207ENST00000486975 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
CLDN11-207ENST00000486975 ZNF428Q96B54 188 aa18.5■□□□□ 0.55
CLDN11-207ENST00000486975 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 POTEJP0CG39 1038 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 AOC3Q16853 763 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-207ENST00000486975 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
CLDN11-207ENST00000486975 DUOX1Q9NRD9 1551 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
CLDN11-207ENST00000486975 IGKV5-2P06315 115 aa18.48■□□□□ 0.55
CLDN11-207ENST00000486975 EPHX2P34913 555 aa18.48■□□□□ 0.55
CLDN11-207ENST00000486975 NEXNQ0ZGT2 675 aa18.48■□□□□ 0.55
CLDN11-207ENST00000486975 PNMA8AQ86V59 439 aaPredicted RBP18.48■□□□□ 0.55
CLDN11-207ENST00000486975 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
CLDN11-207ENST00000486975 ADAMTSL1Q8N6G6 1762 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 PDE8AO60658 829 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 VAMP4O75379 141 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 G2E3Q7L622 706 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
CLDN11-207ENST00000486975 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
CLDN11-207ENST00000486975 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
CLDN11-207ENST00000486975 FLIIQ13045 1269 aa18.46■□□□□ 0.55
CLDN11-207ENST00000486975 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
CLDN11-207ENST00000486975 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
CLDN11-207ENST00000486975 TAF1P21675 1872 aa18.46■□□□□ 0.54
CLDN11-207ENST00000486975 COL4A1P02462 1669 aa18.45■□□□□ 0.54
CLDN11-207ENST00000486975 SCNN1DP51172 638 aa18.45■□□□□ 0.54
CLDN11-207ENST00000486975 HTRA3P83110 453 aa18.45■□□□□ 0.54
CLDN11-207ENST00000486975 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
CLDN11-207ENST00000486975 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms