RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PCCAP05165 728 aaPredicted RBP23.64■■□□□ 1.37
PRPF40A-209ENST00000486100 MPNDQ8N594 471 aa23.64■■□□□ 1.37
PRPF40A-209ENST00000486100 SUPT20HQ8NEM7 779 aa23.64■■□□□ 1.37
PRPF40A-209ENST00000486100 RTFDC1Q9BY42 306 aaPredicted RBP23.64■■□□□ 1.37
PRPF40A-209ENST00000486100 CWC25Q9NXE8 425 aaPredicted RBP23.64■■□□□ 1.37
PRPF40A-209ENST00000486100 VAMP4O75379 141 aa23.63■■□□□ 1.37
PRPF40A-209ENST00000486100 DPP8Q6V1X1 898 aaPredicted RBP23.63■■□□□ 1.37
PRPF40A-209ENST00000486100 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 EIF6P56537 245 aaKnown RBP23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 EXOSC9Q06265 439 aaKnown RBP23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 G2E3Q7L622 706 aa23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 GPC2Q8N158 579 aa23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 SPINK5Q9NQ38 1064 aaPredicted RBP23.62■■□□□ 1.37
PRPF40A-209ENST00000486100 PPIP5K2O43314 1243 aa23.61■■□□□ 1.37
PRPF40A-209ENST00000486100 CELF1Q92879 486 aaKnown RBP23.61■■□□□ 1.37
PRPF40A-209ENST00000486100 TAF1DQ9H5J8 278 aaPredicted RBP23.61■■□□□ 1.37
PRPF40A-209ENST00000486100 IGKV5-2P06315 115 aa23.6■■□□□ 1.37
PRPF40A-209ENST00000486100 NEXNQ0ZGT2 675 aa23.6■■□□□ 1.37
PRPF40A-209ENST00000486100 NIM1KQ8IY84 436 aa23.6■■□□□ 1.37
PRPF40A-209ENST00000486100 MYH16Q9H6N6 1097 aa23.6■■□□□ 1.37
PRPF40A-209ENST00000486100 PDE8AO60658 829 aa23.59■■□□□ 1.37
PRPF40A-209ENST00000486100 AOC3Q16853 763 aa23.59■■□□□ 1.37
PRPF40A-209ENST00000486100 DNAJC5GQ8N7S2 189 aa23.59■■□□□ 1.37
PRPF40A-209ENST00000486100 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
PRPF40A-209ENST00000486100 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.37
PRPF40A-209ENST00000486100 FLIIQ13045 1269 aa23.58■■□□□ 1.37
PRPF40A-209ENST00000486100 CHADLQ6NUI6 762 aa23.58■■□□□ 1.37
PRPF40A-209ENST00000486100 JARID2Q92833 1246 aaPredicted RBP23.58■■□□□ 1.37
PRPF40A-209ENST00000486100 POTEIP0CG38 1075 aa23.57■■□□□ 1.36
PRPF40A-209ENST00000486100 POTEJP0CG39 1038 aa23.57■■□□□ 1.36
PRPF40A-209ENST00000486100 GJA3Q9Y6H8 435 aa23.57■■□□□ 1.36
PRPF40A-209ENST00000486100 LAMB2P55268 1798 aa23.57■■□□□ 1.36
PRPF40A-209ENST00000486100 COL4A5P29400 1685 aa23.57■■□□□ 1.36
PRPF40A-209ENST00000486100 KIAA2012Q0VF49 1180 aa23.56■■□□□ 1.36
PRPF40A-209ENST00000486100 CCDC152Q4G0S7 254 aa23.56■■□□□ 1.36
PRPF40A-209ENST00000486100 ZNRF3Q9ULT6 936 aa23.56■■□□□ 1.36
PRPF40A-209ENST00000486100 CDHR2Q9BYE9 1310 aa23.56■■□□□ 1.36
PRPF40A-209ENST00000486100 NEURL1BA8MQ27 555 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 EPHX2P34913 555 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 HTRA3P83110 453 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 FKBP5Q13451 457 aaPredicted RBP23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 LDHDQ86WU2 507 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 SEC31BQ9NQW1 1179 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 NSFL1CQ9UNZ2 370 aaKnown RBP23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 DDX60Q8IY21 1712 aaKnown RBP23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 ZNF521Q96K83 1311 aa23.55■■□□□ 1.36
PRPF40A-209ENST00000486100 PNMA8AQ86V59 439 aaPredicted RBP23.54■■□□□ 1.36
PRPF40A-209ENST00000486100 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
PRPF40A-209ENST00000486100 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
PRPF40A-209ENST00000486100 H7C1W4 665 aa23.52■■□□□ 1.36
PRPF40A-209ENST00000486100 GPSM2P81274 684 aa23.52■■□□□ 1.36
PRPF40A-209ENST00000486100 CXCL9Q07325 125 aa23.52■■□□□ 1.36
PRPF40A-209ENST00000486100 LMOD1P29536 600 aaPredicted RBP23.51■■□□□ 1.35
PRPF40A-209ENST00000486100 WASHC4Q2M389 1173 aa23.51■■□□□ 1.35
PRPF40A-209ENST00000486100 CCDC85AQ96PX6 553 aaPredicted RBP23.51■■□□□ 1.35
PRPF40A-209ENST00000486100 POLLQ9UGP5 575 aa23.51■■□□□ 1.35
PRPF40A-209ENST00000486100 SCN4AP35499 1836 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 SCNN1DP51172 638 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 CTSWP56202 376 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 GCKRQ14397 625 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 LINS1Q8NG48 757 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 TTLL11Q8NHH1 800 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 CLEC11AQ9Y240 323 aa23.5■■□□□ 1.35
PRPF40A-209ENST00000486100 C6orf229H3BNL8 230 aa23.49■■□□□ 1.35
PRPF40A-209ENST00000486100 EPS15P42566 896 aa23.49■■□□□ 1.35
PRPF40A-209ENST00000486100 KLRG1Q96E93 195 aa23.49■■□□□ 1.35
PRPF40A-209ENST00000486100 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
PRPF40A-209ENST00000486100 TAF1P21675 1872 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 TNIP1Q15025 636 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 CIAPIN1Q6FI81 312 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 UBE3BQ7Z3V4 1068 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 ANKRD18AQ8IVF6 992 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 TBC1D16Q8TBP0 767 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 EYA3Q99504 573 aa23.48■■□□□ 1.35
PRPF40A-209ENST00000486100 YDJCA8MPS7 323 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 RIMBP2O15034 1052 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 RAD17O75943 681 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 ITGBL1O95965 494 aaPredicted RBP23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 COL4A1P02462 1669 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 CDC5LQ99459 802 aaKnown RBP23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 PLA2G12BQ9BX93 195 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 ANKIB1Q9P2G1 1089 aa23.46■■□□□ 1.35
PRPF40A-209ENST00000486100 PASKQ96RG2 1323 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 E9PSI1 815 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 CASP7P55210 303 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 USP50Q70EL3 339 aaPredicted RBP23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 GREM2Q9H772 168 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 GPRC5DQ9NZD1 345 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 LRRC37AA6NMS7 1700 aa23.45■■□□□ 1.34
PRPF40A-209ENST00000486100 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 F6X3S4 739 aa23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 GMPSP49915 693 aaPredicted RBP23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 BEND3Q5T5X7 828 aa23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 CNTROBQ8N137 903 aa23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 ZC3H12CQ9C0D7 883 aaKnown RBP23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 GGA1Q9UJY5 639 aa23.44■■□□□ 1.34
PRPF40A-209ENST00000486100 RTL9Q8NET4 1388 aa23.43■■□□□ 1.34
PRPF40A-209ENST00000486100 MAP1SQ66K74 1059 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms