RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
MSH5-216ENST00000484309 ZNF541Q9H0D2 1346 aa15.71■□□□□ 0.11
MSH5-216ENST00000484309 SCN4AP35499 1836 aa15.71■□□□□ 0.11
MSH5-216ENST00000484309 DDNO94850 711 aaPredicted RBP15.71■□□□□ 0.11
MSH5-216ENST00000484309 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
MSH5-216ENST00000484309 SF3B3Q15393 1217 aaKnown RBP15.71■□□□□ 0.11
MSH5-216ENST00000484309 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
MSH5-216ENST00000484309 CELF1Q92879 486 aaKnown RBP15.71■□□□□ 0.11
MSH5-216ENST00000484309 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
MSH5-216ENST00000484309 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 BBOX1O75936 387 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 TOMM70O94826 608 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 MIER1Q8N108 512 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
MSH5-216ENST00000484309 POTECB2RU33 542 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 F6X3S4 739 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 LARGE2Q8N3Y3 721 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 SEC31BQ9NQW1 1179 aa15.69■□□□□ 0.1
MSH5-216ENST00000484309 E9PSI1 815 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 PDE8AO60658 829 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 VEGFAP15692 232 aaPredicted RBP15.68■□□□□ 0.1
MSH5-216ENST00000484309 AOC3Q16853 763 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 DPP8Q6V1X1 898 aaPredicted RBP15.68■□□□□ 0.1
MSH5-216ENST00000484309 UBE3BQ7Z3V4 1068 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 MPNDQ8N594 471 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
MSH5-216ENST00000484309 SLFN5Q08AF3 891 aa15.67■□□□□ 0.1
MSH5-216ENST00000484309 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
MSH5-216ENST00000484309 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
MSH5-216ENST00000484309 FZD9O00144 591 aa15.66■□□□□ 0.1
MSH5-216ENST00000484309 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
MSH5-216ENST00000484309 HSP90B1P14625 803 aaKnown RBP15.65■□□□□ 0.1
MSH5-216ENST00000484309 HSPA6P17066 643 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 CTSWP56202 376 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 GCKRQ14397 625 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 NIM1KQ8IY84 436 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 LINS1Q8NG48 757 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 GJA3Q9Y6H8 435 aa15.65■□□□□ 0.1
MSH5-216ENST00000484309 H7C1W4 665 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 EIF6P56537 245 aaKnown RBP15.64■□□□□ 0.09
MSH5-216ENST00000484309 RPS8P62241 208 aaKnown RBP15.64■□□□□ 0.09
MSH5-216ENST00000484309 GPSM2P81274 684 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 TMC4Q7Z404 712 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 GPR101Q96P66 508 aaPredicted RBP15.64■□□□□ 0.09
MSH5-216ENST00000484309 BCL2L13Q9BXK5 485 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
MSH5-216ENST00000484309 NSFL1CQ9UNZ2 370 aaKnown RBP15.64■□□□□ 0.09
MSH5-216ENST00000484309 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
MSH5-216ENST00000484309 POTEIP0CG38 1075 aa15.63■□□□□ 0.09
MSH5-216ENST00000484309 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
MSH5-216ENST00000484309 SLC4A10Q6U841 1118 aa15.63■□□□□ 0.09
MSH5-216ENST00000484309 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
MSH5-216ENST00000484309 TTLL11Q8NHH1 800 aa15.63■□□□□ 0.09
MSH5-216ENST00000484309 SCN9AQ15858 1988 aa15.63■□□□□ 0.09
MSH5-216ENST00000484309 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 CASP7P55210 303 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 BEND3Q5T5X7 828 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
MSH5-216ENST00000484309 GREM2Q9H772 168 aa15.62■□□□□ 0.09
MSH5-216ENST00000484309 RIMBP2O15034 1052 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 ANKRD18AQ8IVF6 992 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 GPC2Q8N158 579 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 POLLQ9UGP5 575 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 ADAMTSL1Q8N6G6 1762 aa15.61■□□□□ 0.09
MSH5-216ENST00000484309 PSME4Q14997 1843 aa15.6■□□□□ 0.09
MSH5-216ENST00000484309 IQCA1LA6NCM1 817 aa15.6■□□□□ 0.09
MSH5-216ENST00000484309 FSTL1Q12841 308 aa15.6■□□□□ 0.09
MSH5-216ENST00000484309 FAM161AQ3B820 660 aa15.6■□□□□ 0.09
MSH5-216ENST00000484309 EAPPQ56P03 285 aaPredicted RBP15.6■□□□□ 0.09
MSH5-216ENST00000484309 TAF1DQ9H5J8 278 aaPredicted RBP15.6■□□□□ 0.09
MSH5-216ENST00000484309 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
MSH5-216ENST00000484309 UFL1O94874 794 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 HTRA3P83110 453 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 WASHC4Q2M389 1173 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
MSH5-216ENST00000484309 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
MSH5-216ENST00000484309 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 ANKIB1Q9P2G1 1089 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
MSH5-216ENST00000484309 YDJCA8MPS7 323 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 RAD17O75943 681 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 EPHX2P34913 555 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 CXCL9Q07325 125 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 SRCIN1Q9C0H9 1055 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.08
MSH5-216ENST00000484309 RTL9Q8NET4 1388 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms