RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 H3BRB1 525 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 TSPAN6O43657 245 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 ORC4O43929 436 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 VAMP4O75379 141 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 CDC45O75419 566 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 ABL1P00519 1130 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 HNRNPCP07910 306 aaKnown RBP eCLIP4.25□□□□□ -1.73
FXN-204ENST00000484259 TNNT2P45379 298 aaPredicted RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 EPHB1P54762 984 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 FAM69CQ0P6D2 419 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 SIM2Q14190 667 aaPredicted RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 DCTN1Q14203 1278 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 TAF11Q15544 211 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 GRAMD1BQ3KR37 738 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 ALFQ53S48 1182 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 FAM133BQ5BKY9 247 aaKnown RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 C10orf62Q5T681 223 aaPredicted RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 TMC4Q7Z404 712 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 FBXO41Q8TF61 875 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 FRS2Q8WU20 508 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 ZNF594Q96JF6 807 aaPredicted RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 TRIM47Q96LD4 638 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 CFAP53Q96M91 514 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.25□□□□□ -1.739e-6■■■■■ 27.7
FXN-204ENST00000484259 CXorf56Q9H5V9 222 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 TUT1Q9H6E5 874 aaKnown RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 ENAMQ9NRM1 1142 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 PKD2L1Q9P0L9 805 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 SLAIN2Q9P270 581 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 INTUQ9ULD6 942 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 ZNF652Q9Y2D9 606 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 MRPS23Q9Y3D9 190 aaKnown RBP4.25□□□□□ -1.73
FXN-204ENST00000484259 MRVI1Q9Y6F6 885 aa4.25□□□□□ -1.73
FXN-204ENST00000484259 NBPF26B4DH59 902 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 PRRT4C9JH25 899 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 SLC26A4O43511 780 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 C21orf2O43822 256 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 TCEA3O75764 348 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 S1PR4O95977 384 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 RPN1P04843 607 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 NDUFV2P19404 249 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 CASQ1P31415 396 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 CLK1P49759 484 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 SEC13P55735 322 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 LONRF1Q17RB8 773 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 SWI5Q1ZZU3 235 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 HSP90B2PQ58FF3 399 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 C1QTNF12Q5T7M4 302 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 ACBD5Q5T8D3 534 aaPredicted RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 IQCEQ6IPM2 695 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 PDXDC1Q6P996 788 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 LARP1Q6PKG0 1096 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 TAS1R3Q7RTX0 852 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 RNF135Q8IUD6 432 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 RELL1Q8IUW5 271 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 CYP4X1Q8N118 509 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 NDUFAF2Q8N183 169 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 OGFOD1Q8N543 542 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 APPBP2Q92624 585 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 IRF7Q92985 503 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 CDHR1Q96JP9 859 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 SRPK1Q96SB4 655 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 C12orf49Q9H741 205 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 PPCSQ9HAB8 311 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 ATP13A2Q9NQ11 1180 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 CHST12Q9NRB3 414 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 SIRPGQ9P1W8 387 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 DDX41Q9UJV9 622 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 CDV3Q9UKY7 258 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 PNMA3Q9UL41 463 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 GTF2A1LQ9UNN4 478 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 DIS3Q9Y2L1 958 aaKnown RBP4.24□□□□□ -1.73
FXN-204ENST00000484259 PCDHB3Q9Y5E6 796 aa4.24□□□□□ -1.73
FXN-204ENST00000484259 A0A1W2PRQ8 180 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 SPTLC1O15269 473 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 FIBPO43427 364 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PRMT3O60678 531 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 LILRB3O75022 631 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 P4HBP07237 508 aaKnown RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 TPM2P07951 284 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 FGRP09769 529 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 TGFB3P10600 412 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PDE6BP35913 854 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 MASP1P48740 699 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 PPM1FP49593 454 aaPredicted RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 EIF4G2P78344 907 aaKnown RBP eCLIP4.23□□□□□ -1.73
FXN-204ENST00000484259 MAP2K1Q02750 393 aaPredicted RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 CALD1Q05682 793 aaKnown RBP4.23□□□□□ -1.73
FXN-204ENST00000484259 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 WASHC5Q12768 1159 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 KCNMA1Q12791 1236 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 SERINC3Q13530 473 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 HYIQ5T013 277 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 TAF3Q5VWG9 929 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 KANK3Q6NY19 840 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 CCDC73Q6ZRK6 1079 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 CATIPQ7Z7H3 387 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 USP48Q86UV5 1035 aa4.23□□□□□ -1.73
FXN-204ENST00000484259 SUGP1Q8IWZ8 645 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms