RNA–Protein interactions for RNA: ENST00000481600.5

EDRF1-208, Transcript of erythroid differentiation regulatory factor 1, human

TSL 2

Gene EDRF1, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDRF1-208	ENST00000481600	CEP126	Q9P2H0	1117 aa		13.71	□□□□□ -0.21
EDRF1-208	ENST00000481600	PA2G4	Q9UQ80	394 aa	Known RBP	13.71	□□□□□ -0.21
EDRF1-208	ENST00000481600	XRN1	Q8IZH2	1706 aa	Known RBP	13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	ARHGAP23	Q9P227	1491 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	RNMT	O43148	476 aa	Known RBP	13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	TMEM87A	Q8NBN3	555 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	HYPK	Q9NX55	129 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	SLIT1	O75093	1534 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	CAMK4	Q16566	473 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	TTC39A	Q5SRH9	613 aa		13.7	□□□□□ -0.22
EDRF1-208	ENST00000481600	USP42	Q9H9J4	1324 aa	Known RBP	13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	SERPINC1	P01008	464 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	NAP1L1	P55209	391 aa	Known RBP	13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	MTX1	Q13505	466 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	JMY	Q8N9B5	988 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	CCDC112	Q8NEF3	446 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	USP25	Q9UHP3	1055 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	LRRC37A3	O60309	1634 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	CCDC57	Q2TAC2	916 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	TM6SF1	Q9BZW5	370 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	BRMS1	Q9HCU9	246 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	CFAP45	Q9UL16	551 aa		13.69	□□□□□ -0.22
EDRF1-208	ENST00000481600	PTH1R	Q03431	593 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	RBM33	Q96EV2	1170 aa	Known RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	HSP90B2P	Q58FF3	399 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	LINS1	Q8NG48	757 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	RBM8A	Q9Y5S9	174 aa	Known RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	GRM8	O00222	908 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	HCLS1	P14317	486 aa	Predicted RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	FAM177A1	Q8N128	213 aa	Predicted RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	ADCY9	O60503	1353 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	CCDC171	Q6TFL3	1326 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	PDIA4	P13667	645 aa	Known RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	KRT32	Q14532	448 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	MAP3K11	Q16584	847 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	TOM1L2	Q6ZVM7	507 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	ANKLE2	Q86XL3	938 aa		13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	RGPD8	O14715	1765 aa	Predicted RBP	13.68	□□□□□ -0.22
EDRF1-208	ENST00000481600	GIGYF1	O75420	1035 aa	Predicted RBP	13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	KIF6	Q6ZMV9	814 aa		13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	ZSWIM6	Q9HCJ5	1215 aa		13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	NWD1	Q149M9	1564 aa		13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	DNM1	Q05193	864 aa	Known RBP	13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.67	□□□□□ -0.22
EDRF1-208	ENST00000481600	ADCY5	O95622	1261 aa		13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	CREB3L3	Q68CJ9	461 aa		13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	ANKRD24	Q8TF21	1146 aa		13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	NMI	Q13287	307 aa	Predicted RBP	13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	ADCK5	Q3MIX3	580 aa		13.66	□□□□□ -0.22
EDRF1-208	ENST00000481600	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	6e-8	■■■■■ 46.2
EDRF1-208	ENST00000481600	PTCD1	O75127	700 aa	Known RBP	13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	LARGE1	O95461	756 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	PROSER3	Q2NL68	480 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	CEP57L1	Q8IYX8	460 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	NECAB1	Q8N987	351 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	MTMR6	Q9Y217	621 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	LARP1	Q6PKG0	1096 aa	Known RBP	13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	TRIM22	Q8IYM9	498 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	SUCLG2	Q96I99	432 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	TRIM34	Q9BYJ4	488 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	SETD1B	Q9UPS6	1966 aa	Known RBP	13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	GC	P02774	474 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	FILIP1L	Q4L180	1135 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	GIMAP6	Q6P9H5	292 aa		13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	BICC1	Q9H694	974 aa	Known RBP	13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	TFIP11	Q9UBB9	837 aa	Known RBP	13.65	□□□□□ -0.22
EDRF1-208	ENST00000481600	PRDM11	Q9NQV5	511 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	ADGRL3	Q9HAR2	1447 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	NUP133	Q8WUM0	1156 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	FAM227B	Q96M60	508 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	CBX1	P83916	185 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	ME3	Q16798	604 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	CTNNA3	Q9UI47	895 aa		13.64	□□□□□ -0.23
EDRF1-208	ENST00000481600	IDH1	O75874	414 aa	Known RBP	13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	NECTIN1	Q15223	517 aa		13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	CKAP2L	Q8IYA6	745 aa		13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	EAF2	Q96CJ1	260 aa	Predicted RBP	13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	DYNC1I1	O14576	645 aa		13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	MPHOSPH8	Q99549	860 aa		13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	BBX	Q8WY36	941 aa	Predicted RBP	13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.63	□□□□□ -0.23
EDRF1-208	ENST00000481600	SLC27A2	O14975	620 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	DTNB	O60941	627 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	GUCY1B3	Q02153	619 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	NACAP1	Q9BZK3	213 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	NCAPD2	Q15021	1401 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	KIF13A	Q9H1H9	1805 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	MAP4K1	Q92918	833 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	RUFY1	Q96T51	708 aa		13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	ZNF830	Q96NB3	372 aa	Predicted RBP	13.62	□□□□□ -0.23
EDRF1-208	ENST00000481600	ARHGEF25	Q86VW2	580 aa		13.61	□□□□□ -0.23
EDRF1-208	ENST00000481600	CAGE1	Q8TC20	777 aa		13.61	□□□□□ -0.23
EDRF1-208	ENST00000481600	ACBD3	Q9H3P7	528 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms