RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 VAMP4O75379 141 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
HDAC7-222ENST00000477937 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
HDAC7-222ENST00000477937 IQCA1LA6NCM1 817 aa17.69■□□□□ 0.42
HDAC7-222ENST00000477937 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
HDAC7-222ENST00000477937 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
HDAC7-222ENST00000477937 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-222ENST00000477937 G2E3Q7L622 706 aa17.69■□□□□ 0.42
HDAC7-222ENST00000477937 MPNDQ8N594 471 aa17.69■□□□□ 0.42
HDAC7-222ENST00000477937 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-222ENST00000477937 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
HDAC7-222ENST00000477937 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-222ENST00000477937 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-222ENST00000477937 MYH3P11055 1940 aa17.68■□□□□ 0.42
HDAC7-222ENST00000477937 PDE8AO60658 829 aa17.67■□□□□ 0.42
HDAC7-222ENST00000477937 FLIIQ13045 1269 aa17.67■□□□□ 0.42
HDAC7-222ENST00000477937 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
HDAC7-222ENST00000477937 GPC2Q8N158 579 aa17.67■□□□□ 0.42
HDAC7-222ENST00000477937 LRRC37AA6NMS7 1700 aa17.67■□□□□ 0.42
HDAC7-222ENST00000477937 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
HDAC7-222ENST00000477937 AOC3Q16853 763 aa17.66■□□□□ 0.42
HDAC7-222ENST00000477937 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
HDAC7-222ENST00000477937 CELF1Q92879 486 aaKnown RBP17.66■□□□□ 0.42
HDAC7-222ENST00000477937 COL4A5P29400 1685 aa17.66■□□□□ 0.42
HDAC7-222ENST00000477937 RPS8P62241 208 aaKnown RBP17.65■□□□□ 0.42
HDAC7-222ENST00000477937 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-222ENST00000477937 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
HDAC7-222ENST00000477937 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-222ENST00000477937 HACL1Q9UJ83 578 aa17.65■□□□□ 0.42
HDAC7-222ENST00000477937 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
HDAC7-222ENST00000477937 CWF19L2Q2TBE0 894 aaKnown RBP17.64■□□□□ 0.41
HDAC7-222ENST00000477937 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
HDAC7-222ENST00000477937 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
HDAC7-222ENST00000477937 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 DNAAF4Q8WXU2 420 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
HDAC7-222ENST00000477937 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
HDAC7-222ENST00000477937 POTEIP0CG38 1075 aa17.62■□□□□ 0.41
HDAC7-222ENST00000477937 POTEJP0CG39 1038 aa17.62■□□□□ 0.41
HDAC7-222ENST00000477937 EPHX2P34913 555 aa17.62■□□□□ 0.41
HDAC7-222ENST00000477937 PNMA8AQ86V59 439 aaPredicted RBP17.62■□□□□ 0.41
HDAC7-222ENST00000477937 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
HDAC7-222ENST00000477937 COL4A1P02462 1669 aa17.61■□□□□ 0.41
HDAC7-222ENST00000477937 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
HDAC7-222ENST00000477937 LMOD1P29536 600 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-222ENST00000477937 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-222ENST00000477937 LDHDQ86WU2 507 aa17.61■□□□□ 0.41
HDAC7-222ENST00000477937 C6orf229H3BNL8 230 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 H7C1W4 665 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 CTSWP56202 376 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 GPSM2P81274 684 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 GCKRQ14397 625 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 DNAJC5GQ8N7S2 189 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
HDAC7-222ENST00000477937 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
HDAC7-222ENST00000477937 LTBP1Q14766 1721 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 HTRA3P83110 453 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 CXCL9Q07325 125 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 TTLL11Q8NHH1 800 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 EYA3Q99504 573 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
HDAC7-222ENST00000477937 SPEF2Q9C093 1822 aa17.58■□□□□ 0.41
HDAC7-222ENST00000477937 E9PSI1 815 aa17.58■□□□□ 0.4
HDAC7-222ENST00000477937 TNIP1Q15025 636 aa17.58■□□□□ 0.4
HDAC7-222ENST00000477937 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
HDAC7-222ENST00000477937 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
HDAC7-222ENST00000477937 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
HDAC7-222ENST00000477937 SCNN1DP51172 638 aa17.57■□□□□ 0.4
HDAC7-222ENST00000477937 CIAPIN1Q6FI81 312 aa17.57■□□□□ 0.4
HDAC7-222ENST00000477937 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
HDAC7-222ENST00000477937 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
HDAC7-222ENST00000477937 F6X3S4 739 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 RIMBP2O15034 1052 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 RAD17O75943 681 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 EPS15P42566 896 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 TBC1D16Q8TBP0 767 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 GREM2Q9H772 168 aa17.56■□□□□ 0.4
HDAC7-222ENST00000477937 RTL9Q8NET4 1388 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 BEND3Q5T5X7 828 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 KLRG1Q96E93 195 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 PLA2G12BQ9BX93 195 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 ZC3H12CQ9C0D7 883 aaKnown RBP17.55■□□□□ 0.4
HDAC7-222ENST00000477937 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
HDAC7-222ENST00000477937 YDJCA8MPS7 323 aa17.54■□□□□ 0.4
HDAC7-222ENST00000477937 UFL1O94874 794 aa17.54■□□□□ 0.4
HDAC7-222ENST00000477937 CASP7P55210 303 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms