RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 ANKRD44Q8N8A2 993 aa19.55■□□□□ 0.72
MMP11-208ENST00000477567 TTLL11Q8NHH1 800 aa19.55■□□□□ 0.72
MMP11-208ENST00000477567 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
MMP11-208ENST00000477567 RTL9Q8NET4 1388 aa19.55■□□□□ 0.72
MMP11-208ENST00000477567 TAF1P21675 1872 aa19.54■□□□□ 0.72
MMP11-208ENST00000477567 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
MMP11-208ENST00000477567 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
MMP11-208ENST00000477567 BRCA1P38398 1863 aaKnown RBP19.54■□□□□ 0.72
MMP11-208ENST00000477567 NEFLP07196 543 aa19.53■□□□□ 0.72
MMP11-208ENST00000477567 LMBR1LQ6UX01 489 aa19.52■□□□□ 0.72
MMP11-208ENST00000477567 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
MMP11-208ENST00000477567 PPP1R1BQ9UD71 204 aaPredicted RBP19.52■□□□□ 0.72
MMP11-208ENST00000477567 SRGNP10124 158 aa19.51■□□□□ 0.71
MMP11-208ENST00000477567 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
MMP11-208ENST00000477567 TGFB2P61812 414 aa19.51■□□□□ 0.71
MMP11-208ENST00000477567 ATP8B2P98198 1209 aa19.51■□□□□ 0.71
MMP11-208ENST00000477567 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
MMP11-208ENST00000477567 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
MMP11-208ENST00000477567 RPAP2Q8IXW5 612 aaPredicted RBP19.51■□□□□ 0.71
MMP11-208ENST00000477567 ERICH6BQ5W0A0 696 aa19.5■□□□□ 0.71
MMP11-208ENST00000477567 GREM2Q9H772 168 aa19.49■□□□□ 0.71
MMP11-208ENST00000477567 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
MMP11-208ENST00000477567 CACNA1SQ13698 1873 aa19.49■□□□□ 0.71
MMP11-208ENST00000477567 H0YIN7 160 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 NPR1P16066 1061 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 POLA2Q14181 598 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 SIRT2Q8IXJ6 389 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 SSH3Q8TE77 659 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 SPEF2Q9C093 1822 aa19.48■□□□□ 0.71
MMP11-208ENST00000477567 COL4A1P02462 1669 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 PNMA6EA0A0J9YXQ4 647 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 KCNA3P22001 575 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
MMP11-208ENST00000477567 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 RPGRQ92834 1020 aaKnown RBP19.47■□□□□ 0.71
MMP11-208ENST00000477567 MASTLQ96GX5 879 aa19.47■□□□□ 0.71
MMP11-208ENST00000477567 SRGAP3O43295 1099 aa19.46■□□□□ 0.71
MMP11-208ENST00000477567 ITGA6P23229 1130 aa19.46■□□□□ 0.71
MMP11-208ENST00000477567 IFIT5Q13325 482 aaKnown RBP19.46■□□□□ 0.71
MMP11-208ENST00000477567 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
MMP11-208ENST00000477567 DDX46Q7L014 1031 aaKnown RBP19.46■□□□□ 0.71
MMP11-208ENST00000477567 RBM17Q96I25 401 aaKnown RBP19.46■□□□□ 0.71
MMP11-208ENST00000477567 SLX4Q8IY92 1834 aa19.46■□□□□ 0.71
MMP11-208ENST00000477567 ANKRD18BA2A2Z9 1011 aa19.45■□□□□ 0.7
MMP11-208ENST00000477567 CHRNA5P30532 468 aa19.45■□□□□ 0.7
MMP11-208ENST00000477567 CCDC85AQ96PX6 553 aaPredicted RBP19.45■□□□□ 0.7
MMP11-208ENST00000477567 SEC31BQ9NQW1 1179 aa19.45■□□□□ 0.7
MMP11-208ENST00000477567 HMMRO75330 724 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 DPEP1P16444 411 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 PTPN12Q05209 780 aaKnown RBP19.44■□□□□ 0.7
MMP11-208ENST00000477567 GRAPQ13588 217 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 GRAPLQ8TC17 118 aaPredicted RBP19.44■□□□□ 0.7
MMP11-208ENST00000477567 CDC5LQ99459 802 aaKnown RBP19.44■□□□□ 0.7
MMP11-208ENST00000477567 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
MMP11-208ENST00000477567 COPRSQ9NQ92 184 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
MMP11-208ENST00000477567 LRRC37AA6NMS7 1700 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 A0A1B0GUL6 1792 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 A0A0G2JLW4 131 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 RPS8P62241 208 aaKnown RBP19.43■□□□□ 0.7
MMP11-208ENST00000477567 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
MMP11-208ENST00000477567 FBXO3Q9UK99 471 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
MMP11-208ENST00000477567 BBOX1O75936 387 aa19.42■□□□□ 0.7
MMP11-208ENST00000477567 CELF1Q92879 486 aaKnown RBP19.42■□□□□ 0.7
MMP11-208ENST00000477567 CNKSR1Q969H4 720 aa19.42■□□□□ 0.7
MMP11-208ENST00000477567 SYT17Q9BSW7 474 aa19.42■□□□□ 0.7
MMP11-208ENST00000477567 NOP58Q9Y2X3 529 aaKnown RBP19.42■□□□□ 0.7
MMP11-208ENST00000477567 TMC4Q7Z404 712 aa19.41■□□□□ 0.7
MMP11-208ENST00000477567 ANKRD18AQ8IVF6 992 aa19.41■□□□□ 0.7
MMP11-208ENST00000477567 ZNF622Q969S3 477 aaKnown RBP eCLIP19.41■□□□□ 0.7
MMP11-208ENST00000477567 BSDC1Q9NW68 430 aaPredicted RBP19.41■□□□□ 0.7
MMP11-208ENST00000477567 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
MMP11-208ENST00000477567 ZNF594Q96JF6 807 aaPredicted RBP19.4■□□□□ 0.7
MMP11-208ENST00000477567 PIM2Q9P1W9 311 aa19.4■□□□□ 0.7
MMP11-208ENST00000477567 CHD4Q14839 1912 aa19.39■□□□□ 0.7
MMP11-208ENST00000477567 CIAO1O76071 339 aa19.39■□□□□ 0.69
MMP11-208ENST00000477567 IGHMBP2P38935 993 aaKnown RBP19.39■□□□□ 0.69
MMP11-208ENST00000477567 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
MMP11-208ENST00000477567 TTLL6Q8N841 843 aa19.39■□□□□ 0.69
MMP11-208ENST00000477567 KLHDC4Q8TBB5 520 aa19.39■□□□□ 0.69
MMP11-208ENST00000477567 EYA2O00167 538 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 TAF7LQ5H9L4 462 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 PRPF40BQ6NWY9 871 aaKnown RBP19.38■□□□□ 0.69
MMP11-208ENST00000477567 LDHAL6AQ6ZMR3 332 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 C7orf43Q8WVR3 580 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 MPHOSPH8Q99549 860 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
MMP11-208ENST00000477567 RIPOR2Q9Y4F9 1068 aa19.38■□□□□ 0.69
MMP11-208ENST00000477567 LTBP1Q14766 1721 aa19.37■□□□□ 0.69
MMP11-208ENST00000477567 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
MMP11-208ENST00000477567 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
MMP11-208ENST00000477567 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
MMP11-208ENST00000477567 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms