RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 TMX4Q9H1E5 349 aaPredicted RBP26.96■■□□□ 1.91
SREBF1-210ENST00000471445 SALL2Q9Y467 1007 aaPredicted RBP26.96■■□□□ 1.91
SREBF1-210ENST00000471445 IQCA1LA6NCM1 817 aa26.95■■□□□ 1.9
SREBF1-210ENST00000471445 IRS4O14654 1257 aaPredicted RBP26.95■■□□□ 1.9
SREBF1-210ENST00000471445 RTL5Q5HYW3 569 aaPredicted RBP26.94■■□□□ 1.9
SREBF1-210ENST00000471445 TMC4Q7Z404 712 aa26.94■■□□□ 1.9
SREBF1-210ENST00000471445 LARGE2Q8N3Y3 721 aa26.94■■□□□ 1.9
SREBF1-210ENST00000471445 RTFDC1Q9BY42 306 aaPredicted RBP26.94■■□□□ 1.9
SREBF1-210ENST00000471445 MAP3K2Q9Y2U5 619 aa26.94■■□□□ 1.9
SREBF1-210ENST00000471445 KSR2Q6VAB6 950 aa26.93■■□□□ 1.9
SREBF1-210ENST00000471445 PCCAP05165 728 aaPredicted RBP26.92■■□□□ 1.9
SREBF1-210ENST00000471445 GPC2Q8N158 579 aa26.92■■□□□ 1.9
SREBF1-210ENST00000471445 VPS33BQ9H267 617 aa26.92■■□□□ 1.9
SREBF1-210ENST00000471445 CWC25Q9NXE8 425 aaPredicted RBP26.92■■□□□ 1.9
SREBF1-210ENST00000471445 PI4KAP2A4QPH2 592 aa26.91■■□□□ 1.9
SREBF1-210ENST00000471445 PPIP5K2O43314 1243 aa26.91■■□□□ 1.9
SREBF1-210ENST00000471445 PI4KAP1Q8N8J0 262 aa26.91■■□□□ 1.9
SREBF1-210ENST00000471445 SUPT20HQ8NEM7 779 aa26.91■■□□□ 1.9
SREBF1-210ENST00000471445 CELF1Q92879 486 aaKnown RBP26.91■■□□□ 1.9
SREBF1-210ENST00000471445 TAF1DQ9H5J8 278 aaPredicted RBP26.91■■□□□ 1.9
SREBF1-210ENST00000471445 POTEIP0CG38 1075 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 POTEJP0CG39 1038 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 EIF6P56537 245 aaKnown RBP26.9■■□□□ 1.9
SREBF1-210ENST00000471445 AOC3Q16853 763 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 DPP8Q6V1X1 898 aaPredicted RBP26.9■■□□□ 1.9
SREBF1-210ENST00000471445 G2E3Q7L622 706 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 NIM1KQ8IY84 436 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 MPNDQ8N594 471 aa26.9■■□□□ 1.9
SREBF1-210ENST00000471445 SPINK5Q9NQ38 1064 aaPredicted RBP26.9■■□□□ 1.9
SREBF1-210ENST00000471445 IGKV5-2P06315 115 aa26.89■■□□□ 1.9
SREBF1-210ENST00000471445 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.9
SREBF1-210ENST00000471445 HACL1Q9UJ83 578 aa26.89■■□□□ 1.9
SREBF1-210ENST00000471445 CDHR2Q9BYE9 1310 aa26.89■■□□□ 1.89
SREBF1-210ENST00000471445 VAMP4O75379 141 aa26.88■■□□□ 1.89
SREBF1-210ENST00000471445 SLC4A2P04920 1241 aa26.88■■□□□ 1.89
SREBF1-210ENST00000471445 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
SREBF1-210ENST00000471445 CHADLQ6NUI6 762 aa26.87■■□□□ 1.89
SREBF1-210ENST00000471445 DNAJC5GQ8N7S2 189 aa26.87■■□□□ 1.89
SREBF1-210ENST00000471445 ZNF521Q96K83 1311 aa26.87■■□□□ 1.89
SREBF1-210ENST00000471445 PDE8AO60658 829 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 HTRA3P83110 453 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 KIAA2012Q0VF49 1180 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 FLIIQ13045 1269 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 LDHDQ86WU2 507 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 SPEF2Q9C093 1822 aa26.86■■□□□ 1.89
SREBF1-210ENST00000471445 EPHX2P34913 555 aa26.85■■□□□ 1.89
SREBF1-210ENST00000471445 NEXNQ0ZGT2 675 aa26.85■■□□□ 1.89
SREBF1-210ENST00000471445 MYH16Q9H6N6 1097 aa26.85■■□□□ 1.89
SREBF1-210ENST00000471445 JARID2Q92833 1246 aaPredicted RBP26.84■■□□□ 1.89
SREBF1-210ENST00000471445 NEURL1BA8MQ27 555 aa26.83■■□□□ 1.89
SREBF1-210ENST00000471445 CWF19L2Q2TBE0 894 aaKnown RBP26.83■■□□□ 1.89
SREBF1-210ENST00000471445 CCDC152Q4G0S7 254 aa26.83■■□□□ 1.89
SREBF1-210ENST00000471445 GJA3Q9Y6H8 435 aa26.83■■□□□ 1.89
SREBF1-210ENST00000471445 SCNN1DP51172 638 aa26.82■■□□□ 1.88
SREBF1-210ENST00000471445 RPS8P62241 208 aaKnown RBP26.82■■□□□ 1.88
SREBF1-210ENST00000471445 SEC31BQ9NQW1 1179 aa26.82■■□□□ 1.88
SREBF1-210ENST00000471445 ZNRF3Q9ULT6 936 aa26.82■■□□□ 1.88
SREBF1-210ENST00000471445 FKBP5Q13451 457 aaPredicted RBP26.81■■□□□ 1.88
SREBF1-210ENST00000471445 EAPPQ56P03 285 aaPredicted RBP26.8■■□□□ 1.88
SREBF1-210ENST00000471445 PNMA8AQ86V59 439 aaPredicted RBP26.8■■□□□ 1.88
SREBF1-210ENST00000471445 DNAAF4Q8WXU2 420 aa26.8■■□□□ 1.88
SREBF1-210ENST00000471445 KLRG1Q96E93 195 aa26.8■■□□□ 1.88
SREBF1-210ENST00000471445 LMOD1P29536 600 aaPredicted RBP26.79■■□□□ 1.88
SREBF1-210ENST00000471445 CTSWP56202 376 aa26.79■■□□□ 1.88
SREBF1-210ENST00000471445 GPSM2P81274 684 aa26.79■■□□□ 1.88
SREBF1-210ENST00000471445 NSFL1CQ9UNZ2 370 aaKnown RBP26.79■■□□□ 1.88
SREBF1-210ENST00000471445 CXCL9Q07325 125 aa26.78■■□□□ 1.88
SREBF1-210ENST00000471445 PASKQ96RG2 1323 aa26.78■■□□□ 1.88
SREBF1-210ENST00000471445 RTL9Q8NET4 1388 aa26.78■■□□□ 1.88
SREBF1-210ENST00000471445 CCDC85AQ96PX6 553 aaPredicted RBP26.77■■□□□ 1.88
SREBF1-210ENST00000471445 POLLQ9UGP5 575 aa26.77■■□□□ 1.88
SREBF1-210ENST00000471445 PSME4Q14997 1843 aa26.76■■□□□ 1.88
SREBF1-210ENST00000471445 YDJCA8MPS7 323 aa26.76■■□□□ 1.87
SREBF1-210ENST00000471445 H7C1W4 665 aa26.76■■□□□ 1.87
SREBF1-210ENST00000471445 GCKRQ14397 625 aa26.76■■□□□ 1.87
SREBF1-210ENST00000471445 PODXL2Q9NZ53 605 aa26.76■■□□□ 1.87
SREBF1-210ENST00000471445 SCN9AQ15858 1988 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 EPS15P42566 896 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 WASHC4Q2M389 1173 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 CIAPIN1Q6FI81 312 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 UBE3BQ7Z3V4 1068 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 LINS1Q8NG48 757 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 TTLL11Q8NHH1 800 aa26.75■■□□□ 1.87
SREBF1-210ENST00000471445 CASP7P55210 303 aa26.74■■□□□ 1.87
SREBF1-210ENST00000471445 TBC1D16Q8TBP0 767 aa26.74■■□□□ 1.87
SREBF1-210ENST00000471445 PLA2G12BQ9BX93 195 aa26.74■■□□□ 1.87
SREBF1-210ENST00000471445 GPRC5DQ9NZD1 345 aa26.74■■□□□ 1.87
SREBF1-210ENST00000471445 C6orf229H3BNL8 230 aa26.73■■□□□ 1.87
SREBF1-210ENST00000471445 ITGBL1O95965 494 aaPredicted RBP26.73■■□□□ 1.87
SREBF1-210ENST00000471445 ANKRD18AQ8IVF6 992 aa26.73■■□□□ 1.87
SREBF1-210ENST00000471445 JMYQ8N9B5 988 aa26.73■■□□□ 1.87
SREBF1-210ENST00000471445 EYA3Q99504 573 aa26.73■■□□□ 1.87
SREBF1-210ENST00000471445 CLEC11AQ9Y240 323 aa26.73■■□□□ 1.87
SREBF1-210ENST00000471445 CDC5LQ99459 802 aaKnown RBP26.72■■□□□ 1.87
SREBF1-210ENST00000471445 GREM2Q9H772 168 aa26.72■■□□□ 1.87
SREBF1-210ENST00000471445 CREBZFQ9NS37 354 aa26.72■■□□□ 1.87
SREBF1-210ENST00000471445 RAD17O75943 681 aa26.71■■□□□ 1.87
SREBF1-210ENST00000471445 GMPSP49915 693 aaPredicted RBP26.71■■□□□ 1.87
SREBF1-210ENST00000471445 USP50Q70EL3 339 aaPredicted RBP26.71■■□□□ 1.87
SREBF1-210ENST00000471445 GPR101Q96P66 508 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms