RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 AOC2O75106 756 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 RPS12P25398 132 aaKnown RBP9.05□□□□□ -0.96
SF3A3-205ENST00000470585 CXCL9Q07325 125 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 PKN2Q16513 984 aaKnown RBP9.05□□□□□ -0.96
SF3A3-205ENST00000470585 HLFQ16534 295 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 CIAPIN1Q6FI81 312 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 GIGYF2Q6Y7W6 1299 aaKnown RBP9.05□□□□□ -0.96
SF3A3-205ENST00000470585 ZNF34Q8IZ26 560 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
SF3A3-205ENST00000470585 H7C1D1 291 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 NTSR2O95665 410 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 GMPSP49915 693 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-205ENST00000470585 NOM1Q5C9Z4 860 aaKnown RBP9.04□□□□□ -0.96
SF3A3-205ENST00000470585 SP8Q8IXZ3 490 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 ZNF609O15014 1411 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
SF3A3-205ENST00000470585 AKAP11Q9UKA4 1901 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 HUNKP57058 714 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 FKBP1BP68106 108 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 GRM1Q13255 1194 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 AOC3Q16853 763 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 RGMBQ6NW40 437 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 DPP8Q6V1X1 898 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-205ENST00000470585 NUTM1Q86Y26 1132 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-205ENST00000470585 KDM3BQ7LBC6 1761 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 UBN2Q6ZU65 1347 aa9.03□□□□□ -0.96
SF3A3-205ENST00000470585 FAM155AB1AL88 458 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-205ENST00000470585 NEFMP07197 916 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 PIP4K2AP48426 406 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-205ENST00000470585 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.973e-11■■■■■ 43.1
SF3A3-205ENST00000470585 HSP90AB3PQ58FF7 597 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 CC2D1BQ5T0F9 858 aaKnown RBP9.02□□□□□ -0.97
SF3A3-205ENST00000470585 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 MCM10Q7L590 875 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 CTU1Q7Z7A3 348 aaKnown RBP9.02□□□□□ -0.97
SF3A3-205ENST00000470585 MPNDQ8N594 471 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 LRRC37AA6NMS7 1700 aa9.02□□□□□ -0.97
SF3A3-205ENST00000470585 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
SF3A3-205ENST00000470585 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 EIF4A1P60842 406 aaKnown RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 DDX60Q8IY21 1712 aaKnown RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 UTP14AQ9BVJ6 771 aaKnown RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 GBA2Q9HCG7 927 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 CNOT7Q9UIV1 285 aaKnown RBP9.01□□□□□ -0.97
SF3A3-205ENST00000470585 TSKSQ9UJT2 592 aa9.01□□□□□ -0.97
SF3A3-205ENST00000470585 ABCC4O15439 1325 aa9.01□□□□□ -0.97
SF3A3-205ENST00000470585 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
SF3A3-205ENST00000470585 SLC10A3P09131 477 aa9□□□□□ -0.97
SF3A3-205ENST00000470585 U2AF1L5P0DN76 240 aaPredicted RBP9□□□□□ -0.97
SF3A3-205ENST00000470585 U2AF1Q01081 240 aaKnown RBP eCLIP9□□□□□ -0.97
SF3A3-205ENST00000470585 GRAPQ13588 217 aa9□□□□□ -0.97
SF3A3-205ENST00000470585 DDX46Q7L014 1031 aaKnown RBP9□□□□□ -0.97
SF3A3-205ENST00000470585 KRT26Q7Z3Y9 468 aa9□□□□□ -0.97
SF3A3-205ENST00000470585 SPDYE1Q8NFV5 336 aaPredicted RBP9□□□□□ -0.97
SF3A3-205ENST00000470585 GRAPLQ8TC17 118 aaPredicted RBP9□□□□□ -0.97
SF3A3-205ENST00000470585 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
SF3A3-205ENST00000470585 MMP14P50281 582 aa8.99□□□□□ -0.97
SF3A3-205ENST00000470585 TTLL7Q6ZT98 887 aa8.99□□□□□ -0.97
SF3A3-205ENST00000470585 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
SF3A3-205ENST00000470585 TRPM4Q8TD43 1214 aa8.99□□□□□ -0.97
SF3A3-205ENST00000470585 DCPSQ96C86 337 aaKnown RBP8.99□□□□□ -0.97
SF3A3-205ENST00000470585 RNF186Q9NXI6 227 aa8.99□□□□□ -0.97
SF3A3-205ENST00000470585 GABBR2O75899 941 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 GPTP24298 496 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 ZNF157P51786 506 aaPredicted RBP8.98□□□□□ -0.97
SF3A3-205ENST00000470585 KIF23Q02241 960 aaPredicted RBP8.98□□□□□ -0.97
SF3A3-205ENST00000470585 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 USP48Q86UV5 1035 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 EYA3Q99504 573 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 CFHR5Q9BXR6 569 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 ZNF408Q9H9D4 720 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
SF3A3-205ENST00000470585 PAPPA2Q9BXP8 1791 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 SH3TC1Q8TE82 1336 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 PITPNM2Q9BZ72 1349 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 DUOX1Q9NRD9 1551 aa8.98□□□□□ -0.97
SF3A3-205ENST00000470585 POLR2AP24928 1970 aaKnown RBP8.97□□□□□ -0.97
SF3A3-205ENST00000470585 LAMB2P55268 1798 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 YDJCA8MPS7 323 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 RAD17O75943 681 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 HSP90B1P14625 803 aaKnown RBP8.97□□□□□ -0.97
SF3A3-205ENST00000470585 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 C3orf67Q6ZVT6 689 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 CSRNP1Q96S65 589 aa8.97□□□□□ -0.97
SF3A3-205ENST00000470585 DLG5Q8TDM6 1919 aa8.96□□□□□ -0.97
SF3A3-205ENST00000470585 TRPA1O75762 1119 aa8.96□□□□□ -0.98
SF3A3-205ENST00000470585 VIL1P09327 827 aaKnown RBP8.96□□□□□ -0.98
SF3A3-205ENST00000470585 SF3B3Q15393 1217 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms