RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 C3orf67Q6ZVT6 689 aa22.57■■□□□ 1.2
SF1-212ENST00000463343 LDHDQ86WU2 507 aa22.57■■□□□ 1.2
SF1-212ENST00000463343 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
SF1-212ENST00000463343 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
SF1-212ENST00000463343 HCLS1P14317 486 aaPredicted RBP22.56■■□□□ 1.2
SF1-212ENST00000463343 NEXNQ0ZGT2 675 aa22.56■■□□□ 1.2
SF1-212ENST00000463343 TNS4Q8IZW8 715 aa22.56■■□□□ 1.2
SF1-212ENST00000463343 CWC25Q9NXE8 425 aaPredicted RBP22.56■■□□□ 1.2
SF1-212ENST00000463343 RARSP54136 660 aaKnown RBP22.55■■□□□ 1.2
SF1-212ENST00000463343 CWF19L2Q2TBE0 894 aaKnown RBP22.55■■□□□ 1.2
SF1-212ENST00000463343 TAF1DQ9H5J8 278 aaPredicted RBP22.55■■□□□ 1.2
SF1-212ENST00000463343 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
SF1-212ENST00000463343 NEURL1BA8MQ27 555 aa22.54■■□□□ 1.2
SF1-212ENST00000463343 CRY2Q49AN0 593 aa22.54■■□□□ 1.2
SF1-212ENST00000463343 RTL5Q5HYW3 569 aaPredicted RBP22.54■■□□□ 1.2
SF1-212ENST00000463343 JARID2Q92833 1246 aaPredicted RBP22.54■■□□□ 1.2
SF1-212ENST00000463343 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
SF1-212ENST00000463343 RIC1Q4ADV7 1423 aa22.54■■□□□ 1.2
SF1-212ENST00000463343 PASKQ96RG2 1323 aa22.54■■□□□ 1.2
SF1-212ENST00000463343 POTEIP0CG38 1075 aa22.53■■□□□ 1.2
SF1-212ENST00000463343 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
SF1-212ENST00000463343 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
SF1-212ENST00000463343 CC2D2BQ6DHV5 1058 aa22.53■■□□□ 1.2
SF1-212ENST00000463343 ZBTB38Q8NAP3 1195 aaPredicted RBP22.53■■□□□ 1.2
SF1-212ENST00000463343 FZD9O00144 591 aa22.52■■□□□ 1.2
SF1-212ENST00000463343 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
SF1-212ENST00000463343 BRPF1P55201 1214 aaPredicted RBP22.52■■□□□ 1.2
SF1-212ENST00000463343 BEND3Q5T5X7 828 aa22.52■■□□□ 1.2
SF1-212ENST00000463343 LINS1Q8NG48 757 aa22.52■■□□□ 1.2
SF1-212ENST00000463343 IRS4O14654 1257 aaPredicted RBP22.51■■□□□ 1.19
SF1-212ENST00000463343 HOXA10P31260 410 aaPredicted RBP22.51■■□□□ 1.19
SF1-212ENST00000463343 PSMD1Q99460 953 aa22.51■■□□□ 1.19
SF1-212ENST00000463343 ZNF277Q9NRM2 450 aaPredicted RBP22.51■■□□□ 1.19
SF1-212ENST00000463343 PTPRCP08575 1304 aa22.51■■□□□ 1.19
SF1-212ENST00000463343 H7C1W4 665 aa22.5■■□□□ 1.19
SF1-212ENST00000463343 ITGBL1O95965 494 aaPredicted RBP22.5■■□□□ 1.19
SF1-212ENST00000463343 GCKRQ14397 625 aa22.5■■□□□ 1.19
SF1-212ENST00000463343 PNMA8AQ86V59 439 aaPredicted RBP22.5■■□□□ 1.19
SF1-212ENST00000463343 HACL1Q9UJ83 578 aa22.5■■□□□ 1.19
SF1-212ENST00000463343 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
SF1-212ENST00000463343 NOB1Q9ULX3 412 aaKnown RBP22.49■■□□□ 1.19
SF1-212ENST00000463343 CNTNAP1P78357 1384 aa22.49■■□□□ 1.19
SF1-212ENST00000463343 SLC4A10Q6U841 1118 aa22.48■■□□□ 1.19
SF1-212ENST00000463343 GPC2Q8N158 579 aa22.48■■□□□ 1.19
SF1-212ENST00000463343 RPGRQ92834 1020 aaKnown RBP22.48■■□□□ 1.19
SF1-212ENST00000463343 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
SF1-212ENST00000463343 SNED1Q8TER0 1413 aa22.48■■□□□ 1.19
SF1-212ENST00000463343 TMEM88BA6NKF7 163 aa22.47■■□□□ 1.19
SF1-212ENST00000463343 BCAR3O75815 825 aa22.47■■□□□ 1.19
SF1-212ENST00000463343 SF3B3Q15393 1217 aaKnown RBP22.47■■□□□ 1.19
SF1-212ENST00000463343 RBM17Q96I25 401 aaKnown RBP22.47■■□□□ 1.19
SF1-212ENST00000463343 MKRN1Q9UHC7 482 aaKnown RBP22.47■■□□□ 1.19
SF1-212ENST00000463343 ZNF541Q9H0D2 1346 aa22.47■■□□□ 1.19
SF1-212ENST00000463343 EPHX2P34913 555 aa22.46■■□□□ 1.19
SF1-212ENST00000463343 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
SF1-212ENST00000463343 JDP2Q8WYK2 163 aa22.46■■□□□ 1.19
SF1-212ENST00000463343 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
SF1-212ENST00000463343 ALDH1L1O75891 902 aa22.45■■□□□ 1.18
SF1-212ENST00000463343 CASP7P55210 303 aa22.45■■□□□ 1.18
SF1-212ENST00000463343 UBE3BQ7Z3V4 1068 aa22.45■■□□□ 1.18
SF1-212ENST00000463343 SRCIN1Q9C0H9 1055 aa22.45■■□□□ 1.18
SF1-212ENST00000463343 PDE8AO60658 829 aa22.44■■□□□ 1.18
SF1-212ENST00000463343 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
SF1-212ENST00000463343 ADAMTSL1Q8N6G6 1762 aa22.44■■□□□ 1.18
SF1-212ENST00000463343 PRDM10Q9NQV6 1147 aa22.43■■□□□ 1.18
SF1-212ENST00000463343 EAPPQ56P03 285 aaPredicted RBP22.42■■□□□ 1.18
SF1-212ENST00000463343 DDX46Q7L014 1031 aaKnown RBP22.42■■□□□ 1.18
SF1-212ENST00000463343 ARHGAP45Q92619 1136 aa22.42■■□□□ 1.18
SF1-212ENST00000463343 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
SF1-212ENST00000463343 ABCC4O15439 1325 aa22.41■■□□□ 1.18
SF1-212ENST00000463343 DDX60Q8IY21 1712 aaKnown RBP22.41■■□□□ 1.18
SF1-212ENST00000463343 EIF6P56537 245 aaKnown RBP22.41■■□□□ 1.18
SF1-212ENST00000463343 CNTROBQ8N137 903 aa22.41■■□□□ 1.18
SF1-212ENST00000463343 YTHDC1Q96MU7 727 aaKnown RBP22.41■■□□□ 1.18
SF1-212ENST00000463343 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
SF1-212ENST00000463343 CLEC11AQ9Y240 323 aa22.41■■□□□ 1.18
SF1-212ENST00000463343 KIF16BQ96L93 1317 aa22.4■■□□□ 1.18
SF1-212ENST00000463343 VEGFBP49765 207 aa22.4■■□□□ 1.18
SF1-212ENST00000463343 PLA2G12BQ9BX93 195 aa22.4■■□□□ 1.18
SF1-212ENST00000463343 RASSF10A6NK89 507 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 GRM8O00222 908 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 BBOX1O75936 387 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 GRAPQ13588 217 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 SLC51AQ86UW1 340 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 TTLL11Q8NHH1 800 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
SF1-212ENST00000463343 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.17
SF1-212ENST00000463343 LAMB2P55268 1798 aa22.39■■□□□ 1.17
SF1-212ENST00000463343 PPEF1O14829 653 aaPredicted RBP22.38■■□□□ 1.17
SF1-212ENST00000463343 FOXN1O15353 648 aa22.38■■□□□ 1.17
SF1-212ENST00000463343 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
SF1-212ENST00000463343 CAPN15O75808 1086 aa22.38■■□□□ 1.17
SF1-212ENST00000463343 CTSWP56202 376 aa22.38■■□□□ 1.17
SF1-212ENST00000463343 CCDC152Q4G0S7 254 aa22.38■■□□□ 1.17
SF1-212ENST00000463343 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
SF1-212ENST00000463343 CELF1Q92879 486 aaKnown RBP22.38■■□□□ 1.17
SF1-212ENST00000463343 CCDC85AQ96PX6 553 aaPredicted RBP22.38■■□□□ 1.17
SF1-212ENST00000463343 SEC31BQ9NQW1 1179 aa22.38■■□□□ 1.17
SF1-212ENST00000463343 CTCFP49711 727 aaPredicted RBP22.37■■□□□ 1.17
SF1-212ENST00000463343 DEFB115Q30KQ5 88 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms