RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
BRCA1-207ENST00000461798 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
BRCA1-207ENST00000461798 BBOX1O75936 387 aa11.88□□□□□ -0.51
BRCA1-207ENST00000461798 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
BRCA1-207ENST00000461798 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
BRCA1-207ENST00000461798 SH3TC1Q8TE82 1336 aa11.87□□□□□ -0.51
BRCA1-207ENST00000461798 CCDC88AQ3V6T2 1871 aa11.87□□□□□ -0.51
BRCA1-207ENST00000461798 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
BRCA1-207ENST00000461798 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-207ENST00000461798 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
BRCA1-207ENST00000461798 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
BRCA1-207ENST00000461798 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-207ENST00000461798 C8orf58Q8NAV2 365 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-207ENST00000461798 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 ABCC4O15439 1325 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
BRCA1-207ENST00000461798 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-207ENST00000461798 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
BRCA1-207ENST00000461798 TMC4Q7Z404 712 aa11.85□□□□□ -0.51
BRCA1-207ENST00000461798 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
BRCA1-207ENST00000461798 GPC2Q8N158 579 aa11.85□□□□□ -0.51
BRCA1-207ENST00000461798 KLRG1Q96E93 195 aa11.85□□□□□ -0.51
BRCA1-207ENST00000461798 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-207ENST00000461798 TAF1DQ9H5J8 278 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-207ENST00000461798 IL16Q14005 1332 aa11.85□□□□□ -0.51
BRCA1-207ENST00000461798 GRAPQ13588 217 aa11.84□□□□□ -0.51
BRCA1-207ENST00000461798 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
BRCA1-207ENST00000461798 DDX46Q7L014 1031 aaKnown RBP11.84□□□□□ -0.51
BRCA1-207ENST00000461798 JMYQ8N9B5 988 aa11.84□□□□□ -0.51
BRCA1-207ENST00000461798 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-207ENST00000461798 FAM89AQ96GI7 184 aa11.84□□□□□ -0.51
BRCA1-207ENST00000461798 PHAXQ9H814 394 aaKnown RBP11.84□□□□□ -0.51
BRCA1-207ENST00000461798 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
BRCA1-207ENST00000461798 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 TCERG1O14776 1098 aaKnown RBP11.83□□□□□ -0.52
BRCA1-207ENST00000461798 ANP32CO43423 234 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 EIF6P56537 245 aaKnown RBP11.83□□□□□ -0.52
BRCA1-207ENST00000461798 HTRA3P83110 453 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 SUPT20HQ8NEM7 779 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
BRCA1-207ENST00000461798 EPHX2P34913 555 aa11.82□□□□□ -0.52
BRCA1-207ENST00000461798 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-207ENST00000461798 MPNDQ8N594 471 aa11.82□□□□□ -0.52
BRCA1-207ENST00000461798 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
BRCA1-207ENST00000461798 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-207ENST00000461798 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
BRCA1-207ENST00000461798 IRS4O14654 1257 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 PPIP5K2O43314 1243 aa11.81□□□□□ -0.52
BRCA1-207ENST00000461798 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 DPP8Q6V1X1 898 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
BRCA1-207ENST00000461798 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-207ENST00000461798 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
BRCA1-207ENST00000461798 PASKQ96RG2 1323 aa11.81□□□□□ -0.52
BRCA1-207ENST00000461798 COL4A5P29400 1685 aa11.81□□□□□ -0.52
BRCA1-207ENST00000461798 ANKRD36CQ5JPF3 1778 aa11.8□□□□□ -0.52
BRCA1-207ENST00000461798 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
BRCA1-207ENST00000461798 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
BRCA1-207ENST00000461798 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
BRCA1-207ENST00000461798 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
BRCA1-207ENST00000461798 SCN4AP35499 1836 aa11.8□□□□□ -0.52
BRCA1-207ENST00000461798 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-207ENST00000461798 SCNN1DP51172 638 aa11.79□□□□□ -0.52
BRCA1-207ENST00000461798 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
BRCA1-207ENST00000461798 AOC3Q16853 763 aa11.79□□□□□ -0.52
BRCA1-207ENST00000461798 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-207ENST00000461798 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
BRCA1-207ENST00000461798 MYD88Q99836 296 aa11.79□□□□□ -0.52
BRCA1-207ENST00000461798 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
BRCA1-207ENST00000461798 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-207ENST00000461798 GJA3Q9Y6H8 435 aa11.79□□□□□ -0.52
BRCA1-207ENST00000461798 CXCL9Q07325 125 aa11.78□□□□□ -0.52
BRCA1-207ENST00000461798 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-207ENST00000461798 ZNF428Q96B54 188 aa11.78□□□□□ -0.52
BRCA1-207ENST00000461798 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
BRCA1-207ENST00000461798 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
BRCA1-207ENST00000461798 PI4KAP2A4QPH2 592 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 PDE8AO60658 829 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 IGKV5-2P06315 115 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-207ENST00000461798 EPS15P42566 896 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-207ENST00000461798 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-207ENST00000461798 USP50Q70EL3 339 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-207ENST00000461798 CNTROBQ8N137 903 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 PI4KAP1Q8N8J0 262 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
BRCA1-207ENST00000461798 VAMP4O75379 141 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms