RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
MECP2-206ENST00000460227 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
MECP2-206ENST00000460227 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 CRAMP1Q96RY5 1269 aa16.18■□□□□ 0.18
MECP2-206ENST00000460227 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
MECP2-206ENST00000460227 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
MECP2-206ENST00000460227 CTSWP56202 376 aa16.16■□□□□ 0.18
MECP2-206ENST00000460227 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
MECP2-206ENST00000460227 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
MECP2-206ENST00000460227 C20orf194Q5TEA3 1177 aa16.16■□□□□ 0.18
MECP2-206ENST00000460227 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
MECP2-206ENST00000460227 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
MECP2-206ENST00000460227 MEIS3Q99687 375 aa16.16■□□□□ 0.18
MECP2-206ENST00000460227 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
MECP2-206ENST00000460227 BBOX1O75936 387 aa16.15■□□□□ 0.18
MECP2-206ENST00000460227 GNAI3P08754 354 aa16.15■□□□□ 0.18
MECP2-206ENST00000460227 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
MECP2-206ENST00000460227 HDAC5Q9UQL6 1122 aa16.15■□□□□ 0.18
MECP2-206ENST00000460227 UBTFL1P0CB47 393 aaPredicted RBP16.14■□□□□ 0.17
MECP2-206ENST00000460227 MVPQ14764 893 aaKnown RBP16.14■□□□□ 0.17
MECP2-206ENST00000460227 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
MECP2-206ENST00000460227 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
MECP2-206ENST00000460227 GREM2Q9H772 168 aa16.14■□□□□ 0.17
MECP2-206ENST00000460227 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
MECP2-206ENST00000460227 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
MECP2-206ENST00000460227 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
MECP2-206ENST00000460227 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 GRAPQ13588 217 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 GRAPLQ8TC17 118 aaPredicted RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 CCDC85AQ96PX6 553 aaPredicted RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
MECP2-206ENST00000460227 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
MECP2-206ENST00000460227 KIF13BQ9NQT8 1826 aa16.12■□□□□ 0.17
MECP2-206ENST00000460227 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
MECP2-206ENST00000460227 GPR162Q16538 588 aa16.12■□□□□ 0.17
MECP2-206ENST00000460227 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
MECP2-206ENST00000460227 RTL9Q8NET4 1388 aa16.12■□□□□ 0.17
MECP2-206ENST00000460227 GNAI2P04899 355 aa16.11■□□□□ 0.17
MECP2-206ENST00000460227 LRRFIP2Q9Y608 721 aaKnown RBP16.11■□□□□ 0.17
MECP2-206ENST00000460227 C21orf2O43822 256 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 ITGA6P23229 1130 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 ZBTB40Q9NUA8 1239 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 DDX19BQ9UMR2 479 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 ANKRD31Q8N7Z5 1873 aa16.1■□□□□ 0.17
MECP2-206ENST00000460227 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
MECP2-206ENST00000460227 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
MECP2-206ENST00000460227 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
MECP2-206ENST00000460227 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
MECP2-206ENST00000460227 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
MECP2-206ENST00000460227 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
MECP2-206ENST00000460227 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
MECP2-206ENST00000460227 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
MECP2-206ENST00000460227 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
MECP2-206ENST00000460227 KCNA4P22459 653 aa16.08■□□□□ 0.16
MECP2-206ENST00000460227 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
MECP2-206ENST00000460227 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
MECP2-206ENST00000460227 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
MECP2-206ENST00000460227 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
MECP2-206ENST00000460227 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
MECP2-206ENST00000460227 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
MECP2-206ENST00000460227 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
MECP2-206ENST00000460227 MTX1Q13505 466 aa16.07■□□□□ 0.16
MECP2-206ENST00000460227 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
MECP2-206ENST00000460227 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
MECP2-206ENST00000460227 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
MECP2-206ENST00000460227 TNRC6CQ9HCJ0 1690 aaKnown RBP16.07■□□□□ 0.16
MECP2-206ENST00000460227 ATP8B2P98198 1209 aa16.06■□□□□ 0.16
MECP2-206ENST00000460227 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
MECP2-206ENST00000460227 SOGA3Q5TF21 947 aa16.06■□□□□ 0.16
MECP2-206ENST00000460227 ARHGAP27Q6ZUM4 889 aa16.06■□□□□ 0.16
MECP2-206ENST00000460227 IGHMBP2P38935 993 aaKnown RBP16.05■□□□□ 0.16
MECP2-206ENST00000460227 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
MECP2-206ENST00000460227 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
MECP2-206ENST00000460227 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
MECP2-206ENST00000460227 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
MECP2-206ENST00000460227 MINPP1Q9UNW1 487 aa16.05■□□□□ 0.16
MECP2-206ENST00000460227 PTPN12Q05209 780 aaKnown RBP16.04■□□□□ 0.16
MECP2-206ENST00000460227 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
MECP2-206ENST00000460227 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
MECP2-206ENST00000460227 TMX4Q9H1E5 349 aaPredicted RBP16.04■□□□□ 0.16
MECP2-206ENST00000460227 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
MECP2-206ENST00000460227 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
MECP2-206ENST00000460227 DDX60Q8IY21 1712 aaKnown RBP16.04■□□□□ 0.16
MECP2-206ENST00000460227 UTRNP46939 3433 aa16.03■□□□□ 0.16
MECP2-206ENST00000460227 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
MECP2-206ENST00000460227 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
MECP2-206ENST00000460227 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
MECP2-206ENST00000460227 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
MECP2-206ENST00000460227 PNMA6EA0A0J9YXQ4 647 aa16.02■□□□□ 0.16
MECP2-206ENST00000460227 NFKBIEO00221 500 aa16.02■□□□□ 0.16
MECP2-206ENST00000460227 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms