RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SPEF2Q9C093 1822 aa17.75■□□□□ 0.43
TIMP1-205ENST00000456754 PDE8AO60658 829 aa17.74■□□□□ 0.43
TIMP1-205ENST00000456754 CTSWP56202 376 aa17.74■□□□□ 0.43
TIMP1-205ENST00000456754 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
TIMP1-205ENST00000456754 GOLGB1Q14789 3259 aaKnown RBP17.73■□□□□ 0.43
TIMP1-205ENST00000456754 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
TIMP1-205ENST00000456754 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
TIMP1-205ENST00000456754 MASTLQ96GX5 879 aa17.73■□□□□ 0.43
TIMP1-205ENST00000456754 GREM2Q9H772 168 aa17.73■□□□□ 0.43
TIMP1-205ENST00000456754 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
TIMP1-205ENST00000456754 BCS1LQ9Y276 419 aa17.73■□□□□ 0.43
TIMP1-205ENST00000456754 NPR1P16066 1061 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 FAM161AQ3B820 660 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 ANKRD44Q8N8A2 993 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 RPGRQ92834 1020 aaKnown RBP17.72■□□□□ 0.43
TIMP1-205ENST00000456754 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
TIMP1-205ENST00000456754 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
TIMP1-205ENST00000456754 PIM2Q9P1W9 311 aa17.72■□□□□ 0.43
TIMP1-205ENST00000456754 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
TIMP1-205ENST00000456754 HOXA10P31260 410 aaPredicted RBP17.71■□□□□ 0.43
TIMP1-205ENST00000456754 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.43
TIMP1-205ENST00000456754 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
TIMP1-205ENST00000456754 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
TIMP1-205ENST00000456754 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
TIMP1-205ENST00000456754 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
TIMP1-205ENST00000456754 MVPQ14764 893 aaKnown RBP17.7■□□□□ 0.42
TIMP1-205ENST00000456754 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
TIMP1-205ENST00000456754 RBM17Q96I25 401 aaKnown RBP17.7■□□□□ 0.42
TIMP1-205ENST00000456754 CSF1RP07333 972 aa17.69■□□□□ 0.42
TIMP1-205ENST00000456754 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
TIMP1-205ENST00000456754 CHMP3Q9Y3E7 222 aa17.69■□□□□ 0.42
TIMP1-205ENST00000456754 C21orf2O43822 256 aa17.68■□□□□ 0.42
TIMP1-205ENST00000456754 IRX6P78412 446 aaPredicted RBP17.68■□□□□ 0.42
TIMP1-205ENST00000456754 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
TIMP1-205ENST00000456754 CCDC152Q4G0S7 254 aa17.68■□□□□ 0.42
TIMP1-205ENST00000456754 DDX46Q7L014 1031 aaKnown RBP17.68■□□□□ 0.42
TIMP1-205ENST00000456754 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
TIMP1-205ENST00000456754 ZNF594Q96JF6 807 aaPredicted RBP17.68■□□□□ 0.42
TIMP1-205ENST00000456754 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
TIMP1-205ENST00000456754 ITGA6P23229 1130 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 GRAPQ13588 217 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 GPR162Q16538 588 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
TIMP1-205ENST00000456754 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
TIMP1-205ENST00000456754 PPEF1O14829 653 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-205ENST00000456754 RABL6Q3YEC7 729 aaPredicted RBP17.66■□□□□ 0.42
TIMP1-205ENST00000456754 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
TIMP1-205ENST00000456754 UTRNP46939 3433 aa17.65■□□□□ 0.42
TIMP1-205ENST00000456754 GNAI3P08754 354 aa17.65■□□□□ 0.42
TIMP1-205ENST00000456754 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
TIMP1-205ENST00000456754 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
TIMP1-205ENST00000456754 MS4A1P11836 297 aa17.64■□□□□ 0.41
TIMP1-205ENST00000456754 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
TIMP1-205ENST00000456754 ALDH1B1P30837 517 aa17.64■□□□□ 0.41
TIMP1-205ENST00000456754 SNED1Q8TER0 1413 aa17.64■□□□□ 0.41
TIMP1-205ENST00000456754 FER1L6Q2WGJ9 1857 aa17.63■□□□□ 0.41
TIMP1-205ENST00000456754 WTIPA6NIX2 430 aaPredicted RBP17.63■□□□□ 0.41
TIMP1-205ENST00000456754 GNAI2P04899 355 aa17.63■□□□□ 0.41
TIMP1-205ENST00000456754 RFX5P48382 616 aaPredicted RBP17.63■□□□□ 0.41
TIMP1-205ENST00000456754 RPS8P62241 208 aaKnown RBP17.63■□□□□ 0.41
TIMP1-205ENST00000456754 RASSF7Q02833 373 aa17.63■□□□□ 0.41
TIMP1-205ENST00000456754 PUS3Q9BZE2 481 aaKnown RBP17.63■□□□□ 0.41
TIMP1-205ENST00000456754 A0A1B0GUL6 1792 aa17.63■□□□□ 0.41
TIMP1-205ENST00000456754 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
TIMP1-205ENST00000456754 PRELPP51888 382 aa17.62■□□□□ 0.41
TIMP1-205ENST00000456754 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
TIMP1-205ENST00000456754 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
TIMP1-205ENST00000456754 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
TIMP1-205ENST00000456754 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 NFKBIEO00221 500 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
TIMP1-205ENST00000456754 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 DUOX1Q9NRD9 1551 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 LTBP1Q14766 1721 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 CCDC88AQ3V6T2 1871 aa17.61■□□□□ 0.41
TIMP1-205ENST00000456754 BBOX1O75936 387 aa17.6■□□□□ 0.41
TIMP1-205ENST00000456754 GPSM2P81274 684 aa17.6■□□□□ 0.41
TIMP1-205ENST00000456754 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
TIMP1-205ENST00000456754 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
TIMP1-205ENST00000456754 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
TIMP1-205ENST00000456754 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
TIMP1-205ENST00000456754 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
TIMP1-205ENST00000456754 SP8Q8IXZ3 490 aa17.59■□□□□ 0.41
TIMP1-205ENST00000456754 SBF1O95248 1867 aa17.58■□□□□ 0.41
TIMP1-205ENST00000456754 SNAP23O00161 211 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.4
TIMP1-205ENST00000456754 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 CEP85Q6P2H3 762 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.4
TIMP1-205ENST00000456754 SIL1Q9H173 461 aa17.58■□□□□ 0.4
TIMP1-205ENST00000456754 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 477.5 ms