RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 GREM2Q9H772 168 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.53
GTF2IRD1-203ENST00000455841 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.53
GTF2IRD1-203ENST00000455841 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.53
GTF2IRD1-203ENST00000455841 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.53
GTF2IRD1-203ENST00000455841 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CHST3Q7LGC8 479 aa18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 KDM4AO75164 1064 aa18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 NKX1-1Q15270 411 aaPredicted RBP18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 MEX3CQ5U5Q3 659 aaKnown RBP18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
GTF2IRD1-203ENST00000455841 EYA2O00167 538 aa18.32■□□□□ 0.52
GTF2IRD1-203ENST00000455841 LARGE1O95461 756 aa18.32■□□□□ 0.52
GTF2IRD1-203ENST00000455841 HAND2P61296 217 aa18.32■□□□□ 0.52
GTF2IRD1-203ENST00000455841 AOX1Q06278 1338 aa18.32■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CCDC171Q6TFL3 1326 aa18.32■□□□□ 0.52
GTF2IRD1-203ENST00000455841 ITGA6P23229 1130 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 UTYO14607 1347 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 GOLGA6L3A6NEY3 463 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 TAF5LO75529 589 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 NUCB2P80303 420 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 PANK2Q9BZ23 570 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 RBM27Q9P2N5 1060 aaKnown RBP18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CYP19A1P11511 503 aaPredicted RBP18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CASP7P55210 303 aa18.3■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
GTF2IRD1-203ENST00000455841 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
GTF2IRD1-203ENST00000455841 ATG9AQ7Z3C6 839 aa18.3■□□□□ 0.52
GTF2IRD1-203ENST00000455841 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 TEX13AQ9BXU3 409 aaPredicted RBP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 NIP7Q9Y221 180 aaKnown RBP eCLIP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 LOC102724428A0A0B4J2F2 783 aa18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 IL15P40933 162 aaPredicted RBP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 SIK1P57059 783 aa18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 MAP3K15Q6ZN16 1313 aa18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
GTF2IRD1-203ENST00000455841 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 APPP05067 770 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 PHF14O94880 888 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 RABL6Q3YEC7 729 aaPredicted RBP18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 SCARF1Q14162 830 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 SEC31BQ9NQW1 1179 aa18.28■□□□□ 0.52
GTF2IRD1-203ENST00000455841 SLC27A2O14975 620 aa18.27■□□□□ 0.51
GTF2IRD1-203ENST00000455841 DDX11Q96FC9 970 aa18.27■□□□□ 0.51
GTF2IRD1-203ENST00000455841 FIBPO43427 364 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ATP5JP18859 108 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ITPK1Q13572 414 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ANAPC15P60006 121 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 RNF20Q5VTR2 975 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 TTLL5Q6EMB2 1281 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 LIMCH1Q9UPQ0 1083 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ZDHHC9Q9Y397 364 aa18.26■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ZBTB38Q8NAP3 1195 aaPredicted RBP18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 HIP1O00291 1037 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 DDIT3P35638 169 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ZAP70P43403 619 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 FAM173BQ6P4H8 233 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
GTF2IRD1-203ENST00000455841 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
GTF2IRD1-203ENST00000455841 MCM2P49736 904 aa18.24■□□□□ 0.51
GTF2IRD1-203ENST00000455841 SUSD4Q5VX71 490 aa18.23■□□□□ 0.51
GTF2IRD1-203ENST00000455841 TTLL11Q8NHH1 800 aa18.23■□□□□ 0.51
GTF2IRD1-203ENST00000455841 CWC22Q9HCG8 908 aaKnown RBP18.23■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ROBO1Q9Y6N7 1651 aa18.23■□□□□ 0.51
GTF2IRD1-203ENST00000455841 PCCAP05165 728 aaPredicted RBP18.23■□□□□ 0.51
GTF2IRD1-203ENST00000455841 GJB2P29033 226 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 CCT2P78371 535 aaKnown RBP18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 JAG2Q9Y219 1238 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 EP400Q96L91 3159 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 CTSWP56202 376 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 ME3Q16798 604 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 KBTBD3Q8NAB2 608 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 TOMM22Q9NS69 142 aa18.22■□□□□ 0.51
GTF2IRD1-203ENST00000455841 HAUS7Q99871 368 aa18.21■□□□□ 0.51
GTF2IRD1-203ENST00000455841 USP21Q9UK80 565 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms