RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MYO1CO00159 1063 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 PPFIA1Q13136 1202 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 FAM71BQ8TC56 605 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 VAV2P52735 878 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 SYTL4Q96C24 671 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 CTAGE1Q96RT6 745 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 POLR3DP05423 398 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 BUB1BO60566 1050 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 MARCKSP29966 332 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.99□□□□□ -0.977e-6■■■■□ 24.5
SMG1-202ENST00000446231 SPTLC2O15270 562 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 KIF5BP33176 963 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 MEX3CQ5U5Q3 659 aaKnown RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 GEMIN8Q9NWZ8 242 aaKnown RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 LACTBP83111 547 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 CREB3L3Q68CJ9 461 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 IFT81Q8WYA0 676 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 SEC31AO94979 1220 aaKnown RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 GCKP35557 465 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 MTX1Q13505 466 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 SNCBQ16143 134 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 MYO1BO43795 1136 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 ACTN2P35609 894 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 TCEANC2Q96MN5 208 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
SMG1-202ENST00000446231 NEFHP12036 1026 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 HSP90AA4PQ58FG1 418 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 CCDC178Q5BJE1 867 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 SECISBP2LQ93073 1101 aaKnown RBP8.98□□□□□ -0.97
SMG1-202ENST00000446231 GUCA1BQ9UMX6 200 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 TRIM66O15016 1216 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 TACC1O75410 805 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 KIF4AO95239 1232 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 WHAMMP3Q1A5X7 153 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 ZDHHC9Q9Y397 364 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 CPLX4Q7Z7G2 160 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 EFCAB13Q8IY85 973 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 LEO1Q8WVC0 666 aaPredicted RBP8.98□□□□□ -0.97
SMG1-202ENST00000446231 PCK1P35558 622 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 CCDC96Q2M329 555 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 PPP2R5AQ15172 486 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 CCDC113Q9H0I3 377 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 C8orf58Q8NAV2 365 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 TDRD7Q8NHU6 1098 aaKnown RBP8.98□□□□□ -0.97
SMG1-202ENST00000446231 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 LRRC2Q9BYS8 371 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 PTPRGP23470 1445 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 PRAM1Q96QH2 718 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 RUFY3Q7L099 469 aa8.98□□□□□ -0.97
SMG1-202ENST00000446231 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
SMG1-202ENST00000446231 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 AOX1Q06278 1338 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 MRFAP1L1Q96HT8 127 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 SLC8A1P32418 973 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 MTIF2P46199 727 aaKnown RBP8.97□□□□□ -0.97
SMG1-202ENST00000446231 NEK1Q96PY6 1258 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 SPATA31E1Q6ZUB1 1445 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 ARHGAP6O43182 974 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 CCT5P48643 541 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 NUTM2AQ8IVF1 878 aaPredicted RBP8.97□□□□□ -0.97
SMG1-202ENST00000446231 NCAPGQ9BPX3 1015 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 ARFGAP2Q8N6H7 521 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■□□ 14.7
SMG1-202ENST00000446231 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
SMG1-202ENST00000446231 CYP2C19P33261 490 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 PPFIA4O75335 1185 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 ATAD2Q6PL18 1390 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 AKR1B10O60218 316 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 TMEM51Q9NW97 253 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 GNGT1P63211 74 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 JPH2Q9BR39 696 aaPredicted RBP8.97□□□□□ -0.97
SMG1-202ENST00000446231 UBAC1Q9BSL1 405 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMG1-202ENST00000446231 SPAG1Q07617 926 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
SMG1-202ENST00000446231 RPGRIP1LQ68CZ1 1315 aa8.97□□□□□ -0.97
SMG1-202ENST00000446231 FGFR1OPO95684 399 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 CABS1Q96KC9 395 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 PARD6BQ9BYG5 372 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 NSRP1Q9H0G5 558 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 SSRP1Q08945 709 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 RRS1Q15050 365 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 LLPHQ9BRT6 129 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 TANGO6Q9C0B7 1094 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 SLFN14P0C7P3 912 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 TSPYL6Q8N831 410 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 XPO4Q9C0E2 1151 aaKnown RBP8.96□□□□□ -0.97
SMG1-202ENST00000446231 ZNF521Q96K83 1311 aa8.96□□□□□ -0.97
SMG1-202ENST00000446231 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 RHPN1Q8TCX5 695 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 KRT83P78385 493 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 CCDC158Q5M9N0 1113 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 ODF2LQ9ULJ1 636 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 SPECC1Q5M775 1068 aa8.96□□□□□ -0.98
SMG1-202ENST00000446231 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms