RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LARGE2Q8N3Y3 721 aa26.93■■□□□ 1.9
CDKN3-204ENST00000442975 RBM46Q8TBY0 533 aaKnown RBP26.93■■□□□ 1.9
CDKN3-204ENST00000442975 JDP2Q8WYK2 163 aa26.93■■□□□ 1.9
CDKN3-204ENST00000442975 HSPA6P17066 643 aa26.92■■□□□ 1.9
CDKN3-204ENST00000442975 DPP8Q6V1X1 898 aaPredicted RBP26.92■■□□□ 1.9
CDKN3-204ENST00000442975 CCDC88AQ3V6T2 1871 aa26.91■■□□□ 1.9
CDKN3-204ENST00000442975 PPIP5K2O43314 1243 aa26.91■■□□□ 1.9
CDKN3-204ENST00000442975 SP8Q8IXZ3 490 aa26.91■■□□□ 1.9
CDKN3-204ENST00000442975 CELF1Q92879 486 aaKnown RBP26.91■■□□□ 1.9
CDKN3-204ENST00000442975 CCDC85AQ96PX6 553 aaPredicted RBP26.9■■□□□ 1.9
CDKN3-204ENST00000442975 NEURL1BA8MQ27 555 aa26.89■■□□□ 1.9
CDKN3-204ENST00000442975 TMC4Q7Z404 712 aa26.89■■□□□ 1.9
CDKN3-204ENST00000442975 MPNDQ8N594 471 aa26.89■■□□□ 1.9
CDKN3-204ENST00000442975 DNAAF4Q8WXU2 420 aa26.89■■□□□ 1.9
CDKN3-204ENST00000442975 DICER1Q9UPY3 1922 aaKnown RBP26.88■■□□□ 1.89
CDKN3-204ENST00000442975 E9PSI1 815 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 PDE8AO60658 829 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 AOC3Q16853 763 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 CCDC152Q4G0S7 254 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 NIM1KQ8IY84 436 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 SUPT20HQ8NEM7 779 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 COL4A5P29400 1685 aa26.88■■□□□ 1.89
CDKN3-204ENST00000442975 WDR90Q96KV7 1748 aa26.87■■□□□ 1.89
CDKN3-204ENST00000442975 CDHR2Q9BYE9 1310 aa26.87■■□□□ 1.89
CDKN3-204ENST00000442975 POTECB2RU33 542 aa26.86■■□□□ 1.89
CDKN3-204ENST00000442975 FZD9O00144 591 aa26.86■■□□□ 1.89
CDKN3-204ENST00000442975 EIF6P56537 245 aaKnown RBP26.86■■□□□ 1.89
CDKN3-204ENST00000442975 UBE3BQ7Z3V4 1068 aa26.86■■□□□ 1.89
CDKN3-204ENST00000442975 SMC1BQ8NDV3 1235 aa26.86■■□□□ 1.89
CDKN3-204ENST00000442975 FSTL1Q12841 308 aa26.85■■□□□ 1.89
CDKN3-204ENST00000442975 SEC31BQ9NQW1 1179 aa26.85■■□□□ 1.89
CDKN3-204ENST00000442975 GJA3Q9Y6H8 435 aa26.85■■□□□ 1.89
CDKN3-204ENST00000442975 COL4A1P02462 1669 aa26.85■■□□□ 1.89
CDKN3-204ENST00000442975 IQCA1LA6NCM1 817 aa26.84■■□□□ 1.89
CDKN3-204ENST00000442975 F6X3S4 739 aa26.84■■□□□ 1.89
CDKN3-204ENST00000442975 CTSWP56202 376 aa26.84■■□□□ 1.89
CDKN3-204ENST00000442975 DIEXFQ68CQ4 756 aaKnown RBP26.84■■□□□ 1.89
CDKN3-204ENST00000442975 L3MBTL3Q96JM7 780 aaPredicted RBP26.84■■□□□ 1.89
CDKN3-204ENST00000442975 RTFDC1Q9BY42 306 aaPredicted RBP26.84■■□□□ 1.89
CDKN3-204ENST00000442975 CEP350Q5VT06 3117 aa26.83■■□□□ 1.89
CDKN3-204ENST00000442975 RPS8P62241 208 aaKnown RBP26.83■■□□□ 1.89
CDKN3-204ENST00000442975 LINS1Q8NG48 757 aa26.83■■□□□ 1.89
CDKN3-204ENST00000442975 NSFL1CQ9UNZ2 370 aaKnown RBP26.83■■□□□ 1.89
CDKN3-204ENST00000442975 GCKRQ14397 625 aa26.82■■□□□ 1.88
CDKN3-204ENST00000442975 GPC2Q8N158 579 aa26.82■■□□□ 1.88
CDKN3-204ENST00000442975 DUOX1Q9NRD9 1551 aa26.8■■□□□ 1.88
CDKN3-204ENST00000442975 GPSM2P81274 684 aa26.8■■□□□ 1.88
CDKN3-204ENST00000442975 SLFN5Q08AF3 891 aa26.8■■□□□ 1.88
CDKN3-204ENST00000442975 CDCA7LQ96GN5 454 aa26.8■■□□□ 1.88
CDKN3-204ENST00000442975 LRRC37AA6NMS7 1700 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 C6orf229H3BNL8 230 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 APLP1P51693 650 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 KIAA2012Q0VF49 1180 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 VPS33BQ9H267 617 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 TAF1DQ9H5J8 278 aaPredicted RBP26.79■■□□□ 1.88
CDKN3-204ENST00000442975 HACL1Q9UJ83 578 aa26.79■■□□□ 1.88
CDKN3-204ENST00000442975 H7C1W4 665 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 POTEIP0CG38 1075 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 POTEJP0CG39 1038 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 ANKRD18AQ8IVF6 992 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 MIER1Q8N108 512 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 GREM2Q9H772 168 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 ZNRF3Q9ULT6 936 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 TAF1P21675 1872 aa26.78■■□□□ 1.88
CDKN3-204ENST00000442975 EAPPQ56P03 285 aaPredicted RBP26.77■■□□□ 1.88
CDKN3-204ENST00000442975 SLC4A10Q6U841 1118 aa26.77■■□□□ 1.88
CDKN3-204ENST00000442975 CDC5LQ99459 802 aaKnown RBP26.77■■□□□ 1.88
CDKN3-204ENST00000442975 BEND3Q5T5X7 828 aa26.76■■□□□ 1.87
CDKN3-204ENST00000442975 TTLL11Q8NHH1 800 aa26.76■■□□□ 1.87
CDKN3-204ENST00000442975 GPR101Q96P66 508 aaPredicted RBP26.76■■□□□ 1.87
CDKN3-204ENST00000442975 ANKIB1Q9P2G1 1089 aa26.76■■□□□ 1.87
CDKN3-204ENST00000442975 LMOD1P29536 600 aaPredicted RBP26.75■■□□□ 1.87
CDKN3-204ENST00000442975 EPHX2P34913 555 aa26.75■■□□□ 1.87
CDKN3-204ENST00000442975 WASHC4Q2M389 1173 aa26.75■■□□□ 1.87
CDKN3-204ENST00000442975 BCL2L13Q9BXK5 485 aa26.75■■□□□ 1.87
CDKN3-204ENST00000442975 RIMBP2O15034 1052 aa26.74■■□□□ 1.87
CDKN3-204ENST00000442975 UFL1O94874 794 aa26.74■■□□□ 1.87
CDKN3-204ENST00000442975 CASP7P55210 303 aa26.74■■□□□ 1.87
CDKN3-204ENST00000442975 CHADLQ6NUI6 762 aa26.74■■□□□ 1.87
CDKN3-204ENST00000442975 POLLQ9UGP5 575 aa26.74■■□□□ 1.87
CDKN3-204ENST00000442975 FAM161AQ3B820 660 aa26.73■■□□□ 1.87
CDKN3-204ENST00000442975 MRPL50Q8N5N7 158 aaKnown RBP26.73■■□□□ 1.87
CDKN3-204ENST00000442975 TBC1D16Q8TBP0 767 aa26.73■■□□□ 1.87
CDKN3-204ENST00000442975 EYA3Q99504 573 aa26.73■■□□□ 1.87
CDKN3-204ENST00000442975 RTL9Q8NET4 1388 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 RAD17O75943 681 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 HTRA3P83110 453 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 CXCL9Q07325 125 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 LDHDQ86WU2 507 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 SSH1Q8WYL5 1049 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 PLA2G12BQ9BX93 195 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 GGA1Q9UJY5 639 aa26.72■■□□□ 1.87
CDKN3-204ENST00000442975 SCNN1DP51172 638 aa26.71■■□□□ 1.87
CDKN3-204ENST00000442975 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
CDKN3-204ENST00000442975 DBNDD1Q9H9R9 158 aa26.71■■□□□ 1.87
CDKN3-204ENST00000442975 CLEC11AQ9Y240 323 aa26.71■■□□□ 1.87
CDKN3-204ENST00000442975 CIAPIN1Q6FI81 312 aa26.7■■□□□ 1.86
CDKN3-204ENST00000442975 SMC4Q9NTJ3 1288 aa26.7■■□□□ 1.86
CDKN3-204ENST00000442975 PODXL2Q9NZ53 605 aa26.7■■□□□ 1.86
CDKN3-204ENST00000442975 CHMP3Q9Y3E7 222 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms