RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
TM9SF4-204ENST00000442842 H0YIN7 160 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 GREM2Q9H772 168 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
TM9SF4-204ENST00000442842 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
TM9SF4-204ENST00000442842 DPEP1P16444 411 aa16.96■□□□□ 0.31
TM9SF4-204ENST00000442842 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
TM9SF4-204ENST00000442842 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
TM9SF4-204ENST00000442842 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.312e-6■■□□□ 12.3
TM9SF4-204ENST00000442842 RBM17Q96I25 401 aaKnown RBP16.96■□□□□ 0.31
TM9SF4-204ENST00000442842 KIF13BQ9NQT8 1826 aa16.96■□□□□ 0.3
TM9SF4-204ENST00000442842 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 MASTLQ96GX5 879 aa16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
TM9SF4-204ENST00000442842 KLRG2A4D1S0 409 aaPredicted RBP16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 SRGAP3O43295 1099 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 SRGNP10124 158 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 NPR1P16066 1061 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 ITGA6P23229 1130 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 TGFB2P61812 414 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
TM9SF4-204ENST00000442842 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
TM9SF4-204ENST00000442842 CSF1RP07333 972 aa16.93■□□□□ 0.3
TM9SF4-204ENST00000442842 IFIT5Q13325 482 aaKnown RBP16.93■□□□□ 0.3
TM9SF4-204ENST00000442842 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
TM9SF4-204ENST00000442842 COL4A1P02462 1669 aa16.93■□□□□ 0.3
TM9SF4-204ENST00000442842 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
TM9SF4-204ENST00000442842 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
TM9SF4-204ENST00000442842 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 GRAPQ13588 217 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 SYT17Q9BSW7 474 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 MYH3P11055 1940 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 SRCAPQ6ZRS2 3230 aa16.91■□□□□ 0.3
TM9SF4-204ENST00000442842 DLEC1Q9Y238 1755 aa16.9■□□□□ 0.3
TM9SF4-204ENST00000442842 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
TM9SF4-204ENST00000442842 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
TM9SF4-204ENST00000442842 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
TM9SF4-204ENST00000442842 KCNA3P22001 575 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 HOXA10P31260 410 aaPredicted RBP16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 MTX1Q13505 466 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 SLC51AQ86UW1 340 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 SIL1Q9H173 461 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 PA2G4Q9UQ80 394 aaKnown RBP16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
TM9SF4-204ENST00000442842 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
TM9SF4-204ENST00000442842 RPAP2Q8IXW5 612 aaPredicted RBP16.88■□□□□ 0.29
TM9SF4-204ENST00000442842 TTLL6Q8N841 843 aa16.88■□□□□ 0.29
TM9SF4-204ENST00000442842 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
TM9SF4-204ENST00000442842 HMMRO75330 724 aa16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 AAMPQ13685 434 aa16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
TM9SF4-204ENST00000442842 SPEF2Q9C093 1822 aa16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 POLA2Q14181 598 aa16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
TM9SF4-204ENST00000442842 C21orf2O43822 256 aa16.85■□□□□ 0.29
TM9SF4-204ENST00000442842 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
TM9SF4-204ENST00000442842 OLFM4Q6UX06 510 aa16.85■□□□□ 0.29
TM9SF4-204ENST00000442842 LDHAL6AQ6ZMR3 332 aa16.85■□□□□ 0.29
TM9SF4-204ENST00000442842 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
TM9SF4-204ENST00000442842 BBOX1O75936 387 aa16.84■□□□□ 0.29
TM9SF4-204ENST00000442842 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
TM9SF4-204ENST00000442842 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
TM9SF4-204ENST00000442842 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 TAF1P21675 1872 aa16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 EXOC6BQ9Y2D4 811 aa16.83■□□□□ 0.28
TM9SF4-204ENST00000442842 LRRC37AA6NMS7 1700 aa16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 EYA2O00167 538 aa16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 APBB1O00213 710 aa16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms