RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 MICALL2Q8IY33 904 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 CARD14Q9BXL6 1004 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 XIRP1Q702N8 1843 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 USP17L3A6NCW0 530 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 USP17L4A6NCW7 530 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 DOK7Q18PE1 504 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 USP17L1Q7RTZ2 530 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 FEZ1Q99689 392 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 API5Q9BZZ5 524 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 GMPSP49915 693 aaPredicted RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 PDE3AQ14432 1141 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 TWISTNBQ3B726 338 aaPredicted RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 GIGYF2Q6Y7W6 1299 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 HOXB7P09629 217 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 SMIM5Q71RC9 77 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 TBC1D22AQ8WUA7 517 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 ZFYVE28Q9HCC9 887 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 ANGEL1Q9UNK9 670 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 RGL2O15211 777 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 CCDC191Q8NCU4 936 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 NEUROD6Q96NK8 337 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 THUMPD2Q9BTF0 503 aaKnown RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 TAF1DQ9H5J8 278 aaPredicted RBP5.68□□□□□ -1.5
UBE4A-202ENST00000431736 DBNDD1Q9H9R9 158 aa5.68□□□□□ -1.5
UBE4A-202ENST00000431736 SLC4A2P04920 1241 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 TMPOP42166 694 aaKnown RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 EIF5P55010 431 aaKnown RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 IFT57Q9NWB7 429 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 TMOD4Q9NZQ9 345 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 APAF1O14727 1248 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 NEFLP07196 543 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 UBTFL1P0CB47 393 aaPredicted RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 ZC3H15Q8WU90 426 aaKnown RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 FRAT1Q92837 279 aaPredicted RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 FMNL1O95466 1100 aaPredicted RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 MAP2K2P36507 400 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 CABP5Q9NP86 173 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 SLC5A4Q9NY91 659 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 IVNS1ABPQ9Y6Y0 642 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 WDR33Q9C0J8 1336 aaKnown RBP5.67□□□□□ -1.5
UBE4A-202ENST00000431736 CCDC158Q5M9N0 1113 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 AKAP2Q9Y2D5 859 aa5.67□□□□□ -1.5
UBE4A-202ENST00000431736 LBX1P52954 281 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 PKN2Q16513 984 aaKnown RBP5.66□□□□□ -1.5
UBE4A-202ENST00000431736 HTATIP2Q9BUP3 242 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 RAI14Q9P0K7 980 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 LEMD3Q9Y2U8 911 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 ECE2O60344 883 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 MKRN3Q13064 507 aaKnown RBP5.66□□□□□ -1.5
UBE4A-202ENST00000431736 RGMBQ6NW40 437 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 RAET1EQ8TD07 263 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 PSMD1Q99460 953 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 RBM27Q9P2N5 1060 aaKnown RBP5.66□□□□□ -1.5
UBE4A-202ENST00000431736 ATP6V0A2Q9Y487 856 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 ARHGEF28Q8N1W1 1705 aaKnown RBP5.66□□□□□ -1.5
UBE4A-202ENST00000431736 TOPAZ1Q8N9V7 1692 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 USP16Q9Y5T5 823 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 FKTNO75072 461 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 BAG3O95817 575 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 TTLL5Q6EMB2 1281 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 PODNQ7Z5L7 613 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 DPF3Q92784 378 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 ZNF428Q96B54 188 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 PRDM10Q9NQV6 1147 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 TRPA1O75762 1119 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 SRGNP10124 158 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 FKBP1BP68106 108 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 HSP90AB4PQ58FF6 505 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 DNAAF4Q8WXU2 420 aa5.66□□□□□ -1.5
UBE4A-202ENST00000431736 CDHR2Q9BYE9 1310 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 MANSC4A6NHS7 340 aaPredicted RBP5.65□□□□□ -1.5
UBE4A-202ENST00000431736 DDR1Q08345 913 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 IKQ13123 557 aaPredicted RBP5.65□□□□□ -1.5
UBE4A-202ENST00000431736 UBE3BQ7Z3V4 1068 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 MARF1Q9Y4F3 1742 aaKnown RBP5.65□□□□□ -1.5
UBE4A-202ENST00000431736 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 INHBEP58166 350 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 TTC39AQ5SRH9 613 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 FAM89AQ96GI7 184 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 AS3MTQ9HBK9 375 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 MPHOSPH6Q99547 160 aaKnown RBP5.65□□□□□ -1.5
UBE4A-202ENST00000431736 COA1Q9GZY4 146 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 LRP2BPQ9P2M1 347 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 PNMA3Q9UL41 463 aa5.65□□□□□ -1.5
UBE4A-202ENST00000431736 SLC3A2P08195 630 aaKnown RBP5.65□□□□□ -1.51
UBE4A-202ENST00000431736 GTF2IP78347 998 aa5.65□□□□□ -1.51
UBE4A-202ENST00000431736 TAF1CQ15572 869 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-202ENST00000431736 ERICH6Q7L0X2 663 aa5.65□□□□□ -1.51
UBE4A-202ENST00000431736 LBHD1Q9BQE6 289 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-202ENST00000431736 GGA3Q9NZ52 723 aa5.65□□□□□ -1.51
UBE4A-202ENST00000431736 ABCF2Q9UG63 623 aa5.65□□□□□ -1.51
UBE4A-202ENST00000431736 GNAI3P08754 354 aa5.65□□□□□ -1.51
UBE4A-202ENST00000431736 IRX3P78415 501 aaPredicted RBP5.65□□□□□ -1.51
UBE4A-202ENST00000431736 COA7Q96BR5 231 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms