RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SBF1O95248 1867 aa11.95□□□□□ -0.5
NUP50-206ENST00000422489 EPHX2P34913 555 aa11.95□□□□□ -0.5
NUP50-206ENST00000422489 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
NUP50-206ENST00000422489 GPC2Q8N158 579 aa11.95□□□□□ -0.5
NUP50-206ENST00000422489 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
NUP50-206ENST00000422489 NUP98P52948 1817 aa11.95□□□□□ -0.5
NUP50-206ENST00000422489 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
NUP50-206ENST00000422489 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 LDHDQ86WU2 507 aa11.94□□□□□ -0.5
NUP50-206ENST00000422489 ZBTB38Q8NAP3 1195 aaPredicted RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 CELF1Q92879 486 aaKnown RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 KLRG1Q96E93 195 aa11.94□□□□□ -0.5
NUP50-206ENST00000422489 CCDC85AQ96PX6 553 aaPredicted RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
NUP50-206ENST00000422489 MAP3K2Q9Y2U5 619 aa11.94□□□□□ -0.5
NUP50-206ENST00000422489 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
NUP50-206ENST00000422489 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
NUP50-206ENST00000422489 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 CWC25Q9NXE8 425 aaPredicted RBP11.93□□□□□ -0.5
NUP50-206ENST00000422489 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
NUP50-206ENST00000422489 IL16Q14005 1332 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
NUP50-206ENST00000422489 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 G2E3Q7L622 706 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
NUP50-206ENST00000422489 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
NUP50-206ENST00000422489 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 RAD17O75943 681 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
NUP50-206ENST00000422489 EPS15P42566 896 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 GPSM2P81274 684 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
NUP50-206ENST00000422489 CXCL9Q07325 125 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
NUP50-206ENST00000422489 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 SEC31BQ9NQW1 1179 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
NUP50-206ENST00000422489 G3V3G9 751 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 PDE8AO60658 829 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 TNIP1Q15025 636 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 WDR90Q96KV7 1748 aa11.9□□□□□ -0.5
NUP50-206ENST00000422489 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
NUP50-206ENST00000422489 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 VAMP4O75379 141 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
NUP50-206ENST00000422489 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 FKBP5Q13451 457 aaPredicted RBP11.89□□□□□ -0.51
NUP50-206ENST00000422489 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
NUP50-206ENST00000422489 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
NUP50-206ENST00000422489 EYA3Q99504 573 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
NUP50-206ENST00000422489 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
NUP50-206ENST00000422489 ARFGEF2Q9Y6D5 1785 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
NUP50-206ENST00000422489 SCNN1DP51172 638 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 FLIIQ13045 1269 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
NUP50-206ENST00000422489 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 POLLQ9UGP5 575 aa11.88□□□□□ -0.51
NUP50-206ENST00000422489 COL4A5P29400 1685 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
NUP50-206ENST00000422489 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 TBC1D16Q8TBP0 767 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
NUP50-206ENST00000422489 GPRC5DQ9NZD1 345 aa11.87□□□□□ -0.51
NUP50-206ENST00000422489 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 H7C1W4 665 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 DNAAF4Q8WXU2 420 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 CNOT7Q9UIV1 285 aaKnown RBP11.86□□□□□ -0.51
NUP50-206ENST00000422489 GGA1Q9UJY5 639 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
NUP50-206ENST00000422489 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
NUP50-206ENST00000422489 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
NUP50-206ENST00000422489 H7C1D1 291 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms