RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ATP2B3Q16720 1220 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 STK31Q9BXU1 1019 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 THRAP3Q9Y2W1 955 aaKnown RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 JCADQ9P266 1359 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 NEMFO60524 1076 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 SKILP12757 684 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 MAP2K2P36507 400 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 RARSP54136 660 aaKnown RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 IRX5P78411 483 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 TBC1D9Q6ZT07 1266 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 FERMT3Q86UX7 667 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ZNF622Q969S3 477 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 EYA1Q99502 592 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 KDM2BQ8NHM5 1336 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 TJP1Q07157 1748 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 HOXB7P09629 217 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 RNF187Q5TA31 235 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 LARP1BQ659C4 914 aaKnown RBP6.86□□□□□ -1.31
HDAC9-203ENST00000406072 GBP6Q6ZN66 633 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 CRACR2AQ9BSW2 395 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ZSWIM4Q9H7M6 989 aa6.86□□□□□ -1.31
HDAC9-203ENST00000406072 ZNF165P49910 485 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 ZSCAN26Q16670 478 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 CEP57L1Q8IYX8 460 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 SMARCC1Q92922 1105 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-203ENST00000406072 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 TOM1O60784 492 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 KDM4AO75164 1064 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 DHX8Q14562 1220 aaKnown RBP6.85□□□□□ -1.31
HDAC9-203ENST00000406072 NEK11Q8NG66 645 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 SECISBP2LQ93073 1101 aaKnown RBP6.85□□□□□ -1.31
HDAC9-203ENST00000406072 LY75O60449 1722 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 DOT1LQ8TEK3 1739 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 GOLIM4O00461 696 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 RRS1Q15050 365 aaKnown RBP6.85□□□□□ -1.31
HDAC9-203ENST00000406072 ELF2Q15723 593 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
HDAC9-203ENST00000406072 GBP3Q9H0R5 595 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 ANTXR1Q9H6X2 564 aa6.85□□□□□ -1.31
HDAC9-203ENST00000406072 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
HDAC9-203ENST00000406072 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 EFCC1Q9HA90 598 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 QSER1Q2KHR3 1735 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 FOXO3O43524 673 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 PHACTR2O75167 634 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 ATP6V1AP38606 617 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 TMEM57Q8N5G2 664 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-203ENST00000406072 DNAI1Q9UI46 699 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 CHL1O00533 1208 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 MX1P20591 662 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 PRKAR2BP31323 418 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-203ENST00000406072 GNAI1P63096 354 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 BMP2KLQ5H9B9 411 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 AKAP4Q5JQC9 854 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 OLFM4Q6UX06 510 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 USP48Q86UV5 1035 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 CEP57Q86XR8 500 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 ARHGAP45Q92619 1136 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-203ENST00000406072 ERO1AQ96HE7 468 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 VPS18Q9P253 973 aa6.84□□□□□ -1.31
HDAC9-203ENST00000406072 KDM6AO15550 1401 aaPredicted RBP6.84□□□□□ -1.32
HDAC9-203ENST00000406072 ATRNO75882 1429 aa6.84□□□□□ -1.32
HDAC9-203ENST00000406072 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
HDAC9-203ENST00000406072 UBE2HP62256 183 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 TEX2Q8IWB9 1127 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 ZGPATQ8N5A5 531 aaKnown RBP6.83□□□□□ -1.32
HDAC9-203ENST00000406072 PPM1EQ8WY54 764 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 BCORQ6W2J9 1755 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 LOC102724159A0A0B4J2E5 919 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 AMPHP49418 695 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 PWP2Q15269 919 aaKnown RBP6.83□□□□□ -1.32
HDAC9-203ENST00000406072 CNPY4Q8N129 248 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 CASQ1P31415 396 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 E2F4Q16254 413 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 MEX3CQ5U5Q3 659 aaKnown RBP6.83□□□□□ -1.32
HDAC9-203ENST00000406072 LAMB2P55268 1798 aa6.83□□□□□ -1.32
HDAC9-203ENST00000406072 ZSCAN12O43309 604 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 ME1P48163 572 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 HNRNPH2P55795 449 aaKnown RBP6.82□□□□□ -1.32
HDAC9-203ENST00000406072 AKAP17AQ02040 695 aaKnown RBP6.82□□□□□ -1.32
HDAC9-203ENST00000406072 LRCH2Q5VUJ6 765 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 SYNE3Q6ZMZ3 975 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 BARGINQ6ZT62 677 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 FAM200AQ8TCP9 573 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 CERKQ8TCT0 537 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 ANKRD24Q8TF21 1146 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 LMBRD1Q9NUN5 540 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
HDAC9-203ENST00000406072 TMEM63CQ9P1W3 806 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms