RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 EXOC5O00471 708 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 LMBRD1Q9NUN5 540 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 ATP2B3Q16720 1220 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
SNED1-204ENST00000401884 AOX1Q06278 1338 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 RAD50Q92878 1312 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 METAP2P50579 478 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNED1-204ENST00000401884 CCDC186Q7Z3E2 898 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 IQCA1Q86XH1 822 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 NEMFO60524 1076 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 EPS15P42566 896 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 ATP2B2Q01814 1243 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 RNF41Q9H4P4 317 aaPredicted RBP20.53■□□□□ 0.88
SNED1-204ENST00000401884 C19orf44Q9H6X5 657 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 DCAF5Q96JK2 942 aa20.53■□□□□ 0.88
SNED1-204ENST00000401884 TOP1P11387 765 aaKnown RBP20.52■□□□□ 0.88
SNED1-204ENST00000401884 SSRP1Q08945 709 aaKnown RBP20.52■□□□□ 0.88
SNED1-204ENST00000401884 SOGA3Q5TF21 947 aa20.52■□□□□ 0.88
SNED1-204ENST00000401884 ISM2Q6H9L7 571 aa20.52■□□□□ 0.88
SNED1-204ENST00000401884 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
SNED1-204ENST00000401884 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
SNED1-204ENST00000401884 TCEAL9Q9UHQ7 104 aa20.52■□□□□ 0.88
SNED1-204ENST00000401884 ZNF445P59923 1031 aa20.52■□□□□ 0.87
SNED1-204ENST00000401884 CHST3Q7LGC8 479 aa20.52■□□□□ 0.87
SNED1-204ENST00000401884 DNAJC25Q9H1X3 360 aa20.52■□□□□ 0.87
SNED1-204ENST00000401884 METP08581 1390 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 DTNBO60941 627 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 RUFY1Q96T51 708 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 TRPM1Q7Z4N2 1603 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 MLH3Q9UHC1 1453 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 TYRO3Q06418 890 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
SNED1-204ENST00000401884 AATKQ6ZMQ8 1374 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 FAM227BQ96M60 508 aa20.51■□□□□ 0.87
SNED1-204ENST00000401884 ZNF853P0CG23 659 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 HSPA4P34932 840 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
SNED1-204ENST00000401884 PRIMPOLQ96LW4 560 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 ANTXR1Q9H6X2 564 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 ARHGEF10O15013 1369 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 DYNC1I1O14576 645 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 GSDMDP57764 484 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 TIMM10P62072 90 aa20.5■□□□□ 0.87
SNED1-204ENST00000401884 FAM173BQ6P4H8 233 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 TMC6Q7Z403 805 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 SLC9C2Q5TAH2 1124 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 APOBRQ0VD83 1088 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 ARHGAP29Q52LW3 1261 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 ERCC4Q92889 916 aaPredicted RBP20.49■□□□□ 0.87
SNED1-204ENST00000401884 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
SNED1-204ENST00000401884 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
SNED1-204ENST00000401884 PKP1Q13835 747 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 MFSD6Q6ZSS7 791 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 CCDC43Q96MW1 224 aaKnown RBP20.48■□□□□ 0.87
SNED1-204ENST00000401884 SLC26A6Q9BXS9 759 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 EPB41L2O43491 1005 aaKnown RBP20.48■□□□□ 0.87
SNED1-204ENST00000401884 URI1O94763 535 aaPredicted RBP20.48■□□□□ 0.87
SNED1-204ENST00000401884 MRPS27Q92552 414 aaKnown RBP20.48■□□□□ 0.87
SNED1-204ENST00000401884 CCDC102BQ68D86 513 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 PALD1Q9ULE6 856 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 CTDP1Q9Y5B0 961 aaPredicted RBP20.48■□□□□ 0.87
SNED1-204ENST00000401884 ADCY10Q96PN6 1610 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 KCNG4Q8TDN1 519 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 DBNDD2Q9BQY9 259 aa20.48■□□□□ 0.87
SNED1-204ENST00000401884 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
SNED1-204ENST00000401884 BRD1O95696 1058 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 ZSCAN12O43309 604 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 UQCRFS1P1P0C7P4 283 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
SNED1-204ENST00000401884 FAM135BQ49AJ0 1406 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 ZBTB43O43298 467 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 KCNQ3O43525 872 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 KRT18P05783 430 aaKnown RBP20.47■□□□□ 0.87
SNED1-204ENST00000401884 CBX1P83916 185 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 ALG1Q9BT22 464 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 TMEM63CQ9P1W3 806 aa20.47■□□□□ 0.87
SNED1-204ENST00000401884 SYKP43405 635 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 AK7Q96M32 723 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 SLC27A2O14975 620 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 PRC1O43663 620 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 PTPDC1A2A3K4 754 aa20.46■□□□□ 0.87
SNED1-204ENST00000401884 RNF113AO15541 343 aaKnown RBP20.46■□□□□ 0.87
SNED1-204ENST00000401884 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 USP5P45974 858 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 CCDC129Q6ZRS4 1044 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 DEF6Q9H4E7 631 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 RPS6KB1P23443 525 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 TNNI3KQ59H18 835 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 CATIPQ7Z7H3 387 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 FPGT-TNNI3KV9GXZ4 949 aa20.45■□□□□ 0.86
SNED1-204ENST00000401884 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms