RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
SIN3A-202ENST00000394947 SMC6Q96SB8 1091 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 PPP1R9BQ96SB3 815 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 PPP1R12AO14974 1030 aaPredicted RBP13.97□□□□□ -0.17
SIN3A-202ENST00000394947 CRCPO75575 148 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 AAMPQ13685 434 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
SIN3A-202ENST00000394947 PTPRGP23470 1445 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 KIF2AO00139 706 aaPredicted RBP13.96□□□□□ -0.17
SIN3A-202ENST00000394947 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
SIN3A-202ENST00000394947 AMPD3Q01432 767 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 CFAP157Q5JU67 520 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 HAUS7Q99871 368 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 TCHPQ9BT92 498 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
SIN3A-202ENST00000394947 CHST3Q7LGC8 479 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 CEP83Q9Y592 693 aa13.96□□□□□ -0.17
SIN3A-202ENST00000394947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.96□□□□□ -0.18
SIN3A-202ENST00000394947 PPANQ9NQ55 473 aaKnown RBP13.96□□□□□ -0.18
SIN3A-202ENST00000394947 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.18
SIN3A-202ENST00000394947 KRT9P35527 623 aa13.96□□□□□ -0.18
SIN3A-202ENST00000394947 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.18
SIN3A-202ENST00000394947 STX17P56962 302 aa13.96□□□□□ -0.18
SIN3A-202ENST00000394947 UBLCP1Q8WVY7 318 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-202ENST00000394947 SEPT6Q14141 434 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 TAF12Q16514 161 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 SPAG5Q96R06 1193 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-202ENST00000394947 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-202ENST00000394947 NSRP1Q9H0G5 558 aaKnown RBP13.95□□□□□ -0.18
SIN3A-202ENST00000394947 FAM114A2Q9NRY5 505 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 LZTFL1Q9NQ48 299 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 RPGRIP1LQ68CZ1 1315 aa13.95□□□□□ -0.18
SIN3A-202ENST00000394947 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
SIN3A-202ENST00000394947 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 CCDC121Q6ZUS5 278 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 MAP3K2Q9Y2U5 619 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 TSPY3P0CV98 308 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 TSPY8P0CW00 308 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 FAM114A1Q8IWE2 563 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 FAM184BQ9ULE4 1060 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 ZNF165P49910 485 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 SNX16P57768 344 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 C10orf67Q8IYJ2 551 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 FAM13AO94988 1023 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 AFAP1Q8N556 730 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
SIN3A-202ENST00000394947 CABP5Q9NP86 173 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 DHX58Q96C10 678 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 TXNDC16Q9P2K2 825 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 FEZ2Q9UHY8 353 aaPredicted RBP13.93□□□□□ -0.18
SIN3A-202ENST00000394947 GUCA1BQ9UMX6 200 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 ANXA1P04083 346 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 PPP1R7Q15435 360 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 LIMCH1Q9UPQ0 1083 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 FAM169AQ9Y6X4 670 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 RASAL2Q9UJF2 1139 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 RTEL1-TNFRSF6BF6WH68 1400 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 CAPN2P17655 700 aa13.93□□□□□ -0.18
SIN3A-202ENST00000394947 KRT5P13647 590 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 HPDP32754 393 aaPredicted RBP13.92□□□□□ -0.18
SIN3A-202ENST00000394947 CEP120Q8N960 986 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 HSPA1LP34931 641 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 SYKP43405 635 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 RXRAP19793 462 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 CEP85LQ5SZL2 805 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 CPLX4Q7Z7G2 160 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
SIN3A-202ENST00000394947 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
SIN3A-202ENST00000394947 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
SIN3A-202ENST00000394947 ASIC1P78348 528 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 RFC1P35251 1148 aaPredicted RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 GABPAQ06546 454 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 CCT6BQ92526 530 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 MAK16Q9BXY0 300 aaKnown RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 VEZTQ9HBM0 779 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 SLU7O95391 586 aaKnown RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 GSDMDP57764 484 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms