RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 RTL1A6NKG5 1358 aa17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 UBE4AQ14139 1066 aa17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 OAS2P29728 719 aaKnown RBP17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
SPOCK1-202ENST00000394945 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 TRIM21P19474 475 aaKnown RBP17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 CBX8Q9HC52 389 aa17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 RAB11FIP4Q86YS3 637 aa17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
SPOCK1-202ENST00000394945 FGFR1OPO95684 399 aaKnown RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 AFAP1L1Q8TED9 768 aa17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 MYO1BO43795 1136 aa17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 PROSER2Q86WR7 435 aaPredicted RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 ARFGAP2Q8N6H7 521 aa17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
SPOCK1-202ENST00000394945 SPTLC2O15270 562 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 INPP5BP32019 993 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 NOP2P46087 812 aaKnown RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 SPAG1Q07617 926 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 CCDC96Q2M329 555 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 CHMLP26374 656 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 ESCO1Q5FWF5 840 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 CAPZA3Q96KX2 299 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 LARP1Q6PKG0 1096 aaKnown RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 RSRC1Q96IZ7 334 aaKnown RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 TSG101Q99816 390 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 BAG1Q99933 345 aaPredicted RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 ZNF215Q9UL58 517 aaPredicted RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 FBF1Q8TES7 1133 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 GUCA1BQ9UMX6 200 aa17.78■□□□□ 0.44
SPOCK1-202ENST00000394945 IFIT3O14879 490 aaKnown RBP17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 PER1O15534 1290 aaPredicted RBP17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 NAPBQ9H115 298 aa17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 MICU3Q86XE3 530 aa17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 CCDC61Q9Y6R9 512 aa17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
SPOCK1-202ENST00000394945 NDUFAB1O14561 156 aa17.77■□□□□ 0.43
SPOCK1-202ENST00000394945 HAND2P61296 217 aa17.77■□□□□ 0.43
SPOCK1-202ENST00000394945 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.43
SPOCK1-202ENST00000394945 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.43
SPOCK1-202ENST00000394945 CCDC85AQ96PX6 553 aaPredicted RBP17.77■□□□□ 0.43
SPOCK1-202ENST00000394945 KRT86O43790 486 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 TACC1O75410 805 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 B4GALNT4Q76KP1 1039 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 CPLX4Q7Z7G2 160 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 Q6ZUG5 572 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 ANKS4BQ8N8V4 417 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 CHMP4BP1P59074 171 aa17.76■□□□□ 0.43
SPOCK1-202ENST00000394945 MAP2K2P36507 400 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 AFMP43652 599 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 IDI1Q13907 227 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 CCDC6Q16204 474 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 ERCC6LQ2NKX8 1250 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 C8orf58Q8NAV2 365 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 NEK11Q8NG66 645 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 NSD2O96028 1365 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 GOLIM4O00461 696 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 VAV2P52735 878 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 NME9Q86XW9 330 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 SSR1P43307 286 aaKnown RBP17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 ATP8B2P98198 1209 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 NSRP1Q9H0G5 558 aaKnown RBP17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 LRP2BPQ9P2M1 347 aa17.75■□□□□ 0.43
SPOCK1-202ENST00000394945 BRD1O95696 1058 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 KIF5AQ12840 1032 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 MKRN1Q9UHC7 482 aaKnown RBP17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 ATP10BO94823 1461 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 ADGRF5Q8IZF2 1346 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 KRT83P78385 493 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 MYL5Q02045 173 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 MPHOSPH8Q99549 860 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 CLSTN2Q9H4D0 955 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 CPA1P15085 419 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 CETN2P41208 172 aa17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 POLR3AO14802 1390 aaPredicted RBP17.74■□□□□ 0.43
SPOCK1-202ENST00000394945 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms