RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 A6NHS1 94 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 ATXN7O15265 892 aaPredicted RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 GFRA3O60609 400 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 ST13P50502 369 aaKnown RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 HDLBPQ00341 1268 aaKnown RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 FANCCQ00597 558 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 NEUROD1Q13562 356 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 SF3A1Q15459 793 aaKnown RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 TAF1CQ15572 869 aaPredicted RBP4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 KIAA0319Q5VV43 1072 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 GALNT12Q8IXK2 581 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 KIFC2Q96AC6 838 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 TGIF2Q9GZN2 237 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 SENP2Q9HC62 589 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 GPAMQ9HCL2 828 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 TMEM63CQ9P1W3 806 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 TRAK1Q9UPV9 953 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 USP31Q70CQ4 1352 aa4.63□□□□□ -1.67
TRAJ40-201ENST00000390497 IGSF3O75054 1194 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 GADD45BO75293 160 aaPredicted RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 XRCC5P13010 732 aaKnown RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 TRIP4Q15650 581 aaPredicted RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 NAALADL2Q58DX5 795 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 METTL16Q86W50 562 aaKnown RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 NT5DC4Q86YG4 428 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 C1orf127Q8N9H9 656 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 SLC43A3Q8NBI5 491 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 EPS8L3Q8TE67 593 aaKnown RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 SREK1Q8WXA9 508 aaKnown RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 KLRG1Q96E93 195 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 PNMA5Q96PV4 448 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 SETDB2Q96T68 719 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 GSX2Q9BZM3 304 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 FOXD3Q9UJU5 478 aaPredicted RBP4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 DNMT3LQ9UJW3 386 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 PHF24Q9UPV7 400 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 USP20Q9Y2K6 914 aa4.62□□□□□ -1.67
TRAJ40-201ENST00000390497 SLC35F4A4IF30 521 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 PHF20L1A8MW92 1017 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 POTECB2RU33 542 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 SASH3O75995 380 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 MAP3K6O95382 1288 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 RLBP1P12271 317 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 BMP1P13497 986 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 TNP2Q05952 138 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 PCSK7Q16549 785 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 FOXR1Q6PIV2 292 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 RIPOR1Q6ZS17 1223 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 HS2ST1Q7LGA3 356 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 TRIM22Q8IYM9 498 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 ZNF654Q8IZM8 581 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 OR13H1Q8NG92 308 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 OSBPL7Q9BZF2 842 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 NUCKS1Q9H1E3 243 aaKnown RBP4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 SUV39H2Q9H5I1 410 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 ATP13A2Q9NQ11 1180 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 RNF19AQ9NV58 838 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 MARK1Q9P0L2 795 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 CNTN3Q9P232 1028 aa4.61□□□□□ -1.67
TRAJ40-201ENST00000390497 SENP3-EIF4A1A0A087X0R7 540 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 EREGO14944 169 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 KHNYNO15037 678 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 EFSO43281 561 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 PSAPP07602 524 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 CTSHP09668 335 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 MAPTP10636 758 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 TARSP26639 723 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 GRNP28799 593 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 GSTT1P30711 240 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 SOX18P35713 384 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 PTSQ03393 145 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 PTPN12Q05209 780 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 SFSWAPQ12872 951 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 HYAL2Q12891 473 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 FAM182BQ5T319 152 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 C9orf131Q5VYM1 1079 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 USPL1Q5W0Q7 1092 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 VPS37DQ86XT2 251 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 NOC4LQ9BVI4 516 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 BCO2Q9BYV7 579 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 CHRDQ9H2X0 955 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 CCSER2Q9H7U1 834 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 TLR7Q9NYK1 1049 aaKnown RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 SALL4Q9UJQ4 1053 aa4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.6□□□□□ -1.67
TRAJ40-201ENST00000390497 RARAP10276 462 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 VEGFBP49765 207 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 RAD51AP2Q09MP3 1159 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 PWP1Q13610 501 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 NXPE4Q6UWF7 544 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 ANKRD24Q8TF21 1146 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 UBXN4Q92575 508 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 SPACA7Q96KW9 195 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 EHD4Q9H223 541 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 NPHS2Q9NP85 383 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 AAASQ9NRG9 546 aa4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 ATXN7L1Q9ULK2 861 aaPredicted RBP4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.59□□□□□ -1.67
TRAJ40-201ENST00000390497 BNIP3LO60238 219 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms