RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PROCA1Q8NCQ7 364 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 SARNPP82979 210 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 KANK3Q6NY19 840 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 PAXBP1Q9Y5B6 917 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CAPN2P17655 700 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 ARID4AP29374 1257 aaPredicted RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 ZNF165P49910 485 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 PRPF31Q8WWY3 499 aaKnown RBP6.68□□□□□ -1.34
RFX3-204ENST00000382004 STMN2Q93045 179 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 CABP5Q9NP86 173 aa6.68□□□□□ -1.34
RFX3-204ENST00000382004 GOLIM4O00461 696 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 STAT6P42226 847 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 HAND2P61296 217 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 RASA3Q14644 834 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 VPS52Q8N1B4 723 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 ZNF830Q96NB3 372 aaPredicted RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 RPGRIP1LQ68CZ1 1315 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CIB2O75838 187 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 IARSP41252 1262 aaKnown RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 CCDC14Q49A88 953 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CCDC110Q8TBZ0 833 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 KIAA1524Q8TCG1 905 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 IFT81Q8WYA0 676 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 LIMCH1Q9UPQ0 1083 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 TACC3Q9Y6A5 838 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CCDC171Q6TFL3 1326 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CCDC102BQ68D86 513 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 FAM114A2Q9NRY5 505 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.67□□□□□ -1.34
RFX3-204ENST00000382004 TACC1O75410 805 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CCDC170Q8IYT3 715 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 TCHPQ9BT92 498 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 LRRC27Q9C0I9 530 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 DNAI1Q9UI46 699 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 HSPA1LP34931 641 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 CABP1Q9NZU7 370 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 VPS18Q9P253 973 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CPSF2Q9P2I0 782 aaKnown RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 GNAT3A8MTJ3 354 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 PRPHP41219 470 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 CEP85LQ5SZL2 805 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 WDR63Q8IWG1 891 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 MAK16Q9BXY0 300 aaKnown RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 IMPG2Q9BZV3 1241 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CTAGE9A4FU28 777 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 FAM13AO94988 1023 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 GAS8O95995 478 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 METAP2P50579 478 aaKnown RBP eCLIP6.67□□□□□ -1.34
RFX3-204ENST00000382004 SETDB1Q15047 1291 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 CFAP70Q5T0N1 1121 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
RFX3-204ENST00000382004 PYM1Q9BRP8 204 aaKnown RBP6.67□□□□□ -1.34
RFX3-204ENST00000382004 PPP1R7Q15435 360 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 NBPF1Q3BBV0 1214 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 RSRC1Q96IZ7 334 aaKnown RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.66□□□□□ -1.34
RFX3-204ENST00000382004 RMND1Q9NWS8 449 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 TMOD3Q9NYL9 352 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 SLC12A5Q9H2X9 1139 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 ORC3Q9UBD5 711 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 CASQ2O14958 399 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 ATP2A2P16615 1042 aaKnown RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 ALDH3A1P30838 453 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 PPP2R5CQ13362 524 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 PPP1R21Q6ZMI0 780 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 USP37Q86T82 979 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 RPAP2Q8IXW5 612 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 TRMT112Q9UI30 125 aaKnown RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 PLEKHH1Q9ULM0 1364 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 SYKP43405 635 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 IRX3P78415 501 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 LACTBP83111 547 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 INTS8Q75QN2 995 aaKnown RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 RSPH3Q86UC2 560 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 PPFIBP2Q8ND30 876 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 ERMNQ8TAM6 284 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 SAMD15Q9P1V8 674 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 CCDC88BA6NC98 1476 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 EBAG9O00559 213 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 PDE4BQ07343 736 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 DUSP27Q5VZP5 1158 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 GIMAP6Q6P9H5 292 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 NUF2Q9BZD4 464 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 PDS5BQ9NTI5 1447 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 HLA-DOAP06340 250 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 CUL4BQ13620 913 aa6.66□□□□□ -1.34
RFX3-204ENST00000382004 UBLCP1Q8WVY7 318 aaPredicted RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
RFX3-204ENST00000382004 FCHSD2O94868 740 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 MFSD6Q6ZSS7 791 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 PPP1R12CQ9BZL4 782 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 VIMP08670 466 aaKnown RBP6.65□□□□□ -1.34
RFX3-204ENST00000382004 GPTP24298 496 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 PLS1Q14651 629 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 CCDC117Q8IWD4 279 aaPredicted RBP6.65□□□□□ -1.34
RFX3-204ENST00000382004 CALM1P0DP23 149 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms