RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 USTQ9Y2C2 406 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 GCP02774 474 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 TEFQ10587 303 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 AIMP1Q12904 312 aaKnown RBP7.75□□□□□ -1.17
CHD6-202ENST00000373222 PI4K2BQ8TCG2 481 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 RHPN1Q8TCX5 695 aa7.75□□□□□ -1.17
CHD6-202ENST00000373222 MED1Q15648 1581 aaPredicted RBP7.74□□□□□ -1.17
CHD6-202ENST00000373222 ZC3H4Q9UPT8 1303 aaKnown RBP7.74□□□□□ -1.17
CHD6-202ENST00000373222 KLHDC4Q8TBB5 520 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 OXER1Q8TDS5 423 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 DNAAF4Q8WXU2 420 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
CHD6-202ENST00000373222 IRF6O14896 467 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 CWC27Q6UX04 472 aaKnown RBP7.74□□□□□ -1.17
CHD6-202ENST00000373222 ANKLE2Q86XL3 938 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 CABLES1Q8TDN4 633 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
CHD6-202ENST00000373222 MAP3K2Q9Y2U5 619 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 LMO7Q8WWI1 1683 aa7.74□□□□□ -1.17
CHD6-202ENST00000373222 ANKRD24Q8TF21 1146 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
CHD6-202ENST00000373222 STAP2Q9UGK3 403 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 RNMTO43148 476 aaKnown RBP7.73□□□□□ -1.17
CHD6-202ENST00000373222 KLHL40Q2TBA0 621 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 ZSCAN23Q3MJ62 389 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 ARHGEF25Q86VW2 580 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 PBXIP1Q96AQ6 731 aa7.73□□□□□ -1.17
CHD6-202ENST00000373222 ANKRD62A6NC57 917 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 TBC1D12O60347 775 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
CHD6-202ENST00000373222 CHGBP05060 677 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 MAP2K5Q13163 448 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 CLEC17AQ6ZS10 378 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 KAZALD1Q96I82 304 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 SIL1Q9H173 461 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 TLR7Q9NYK1 1049 aaKnown RBP7.72□□□□□ -1.17
CHD6-202ENST00000373222 TMEM63CQ9P1W3 806 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 ADGRL3Q9HAR2 1447 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 C5P01031 1676 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 PXDNLA1KZ92 1463 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 LARGE1O95461 756 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 MYL6BP14649 208 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 PRIM1P49642 420 aaKnown RBP7.72□□□□□ -1.17
CHD6-202ENST00000373222 TTLL12Q14166 644 aaPredicted RBP7.72□□□□□ -1.17
CHD6-202ENST00000373222 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 AKAP4Q5JQC9 854 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 RBSNQ9H1K0 784 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 NDUFB9Q9Y6M9 179 aa7.72□□□□□ -1.17
CHD6-202ENST00000373222 LOC102724159A0A0B4J2E5 919 aa7.71□□□□□ -1.17
CHD6-202ENST00000373222 NUCB2P80303 420 aa7.71□□□□□ -1.17
CHD6-202ENST00000373222 PTH1RQ03431 593 aa7.71□□□□□ -1.17
CHD6-202ENST00000373222 OS9Q13438 667 aaPredicted RBP7.71□□□□□ -1.17
CHD6-202ENST00000373222 PWP2Q15269 919 aaKnown RBP7.71□□□□□ -1.17
CHD6-202ENST00000373222 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.17
CHD6-202ENST00000373222 SIPA1L3O60292 1781 aaPredicted RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 SYCE3A1L190 88 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 GOLGA6L22H0YM25 854 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 GADD45BO75293 160 aaPredicted RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 TCF3P15923 654 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 NASPP49321 788 aaPredicted RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 CHRNA2Q15822 529 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 SKOR2Q2VWA4 1001 aaPredicted RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 ADCK5Q3MIX3 580 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 C1orf141Q5JVX7 400 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 EDC3Q96F86 508 aaKnown RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 SUCLG2Q96I99 432 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 SNRKQ9NRH2 765 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 C9orf78Q9NZ63 289 aaPredicted RBP7.71□□□□□ -1.18
CHD6-202ENST00000373222 SNX14Q9Y5W7 946 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 TAF6LQ9Y6J9 622 aa7.71□□□□□ -1.18
CHD6-202ENST00000373222 SPDYE5A6NIY4 337 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 SGSM2O43147 1006 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 MARCH6O60337 910 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 MFSD10Q14728 455 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 PLEKHO1Q53GL0 409 aaPredicted RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 ZNF662Q6ZS27 426 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 GLMNQ92990 594 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 LSG1Q9H089 658 aaKnown RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 CCDC8Q9H0W5 538 aaPredicted RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 BICC1Q9H694 974 aaKnown RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 HSPA4P34932 840 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 CAMK2BQ13554 666 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 PDIA6Q15084 440 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 EPHA10Q5JZY3 1008 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 KRT28Q7Z3Y7 464 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 NFATC2IPQ8NCF5 419 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 PROCA1Q8NCQ7 364 aaPredicted RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 RNF214Q8ND24 703 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 KIF1BPQ96EK5 621 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 TCEANC2Q96MN5 208 aa7.7□□□□□ -1.18
CHD6-202ENST00000373222 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 DBF4Q9UBU7 674 aaPredicted RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 TRPM3Q9HCF6 1732 aaPredicted RBP7.7□□□□□ -1.18
CHD6-202ENST00000373222 ESPNB1AK53 854 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 SASH1O94885 1247 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 IGKV5-2P06315 115 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 RFX1P22670 979 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 AK2P54819 239 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 CUL4AQ13619 759 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms