RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 CSF1RP07333 972 aa25.32■■□□□ 1.64
CD55-203ENST00000367063 CCDC152Q4G0S7 254 aa25.32■■□□□ 1.64
CD55-203ENST00000367063 KLRG2A4D1S0 409 aaPredicted RBP25.32■■□□□ 1.64
CD55-203ENST00000367063 AAMPQ13685 434 aa25.32■■□□□ 1.64
CD55-203ENST00000367063 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
CD55-203ENST00000367063 C2CD5Q86YS7 1000 aa25.31■■□□□ 1.64
CD55-203ENST00000367063 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
CD55-203ENST00000367063 GREM2Q9H772 168 aa25.31■■□□□ 1.64
CD55-203ENST00000367063 CD2APQ9Y5K6 639 aa25.31■■□□□ 1.64
CD55-203ENST00000367063 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
CD55-203ENST00000367063 H0YIN7 160 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 SRGNP10124 158 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 CEP85Q6P2H3 762 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 SRGAP3O43295 1099 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 CHRNA5P30532 468 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 PDZRN3Q9UPQ7 1066 aa25.29■■□□□ 1.64
CD55-203ENST00000367063 COL11A2P13942 1736 aaPredicted RBP25.28■■□□□ 1.64
CD55-203ENST00000367063 ITGA6P23229 1130 aa25.28■■□□□ 1.64
CD55-203ENST00000367063 TGFB2P61812 414 aa25.28■■□□□ 1.64
CD55-203ENST00000367063 CCDC57Q2TAC2 916 aa25.28■■□□□ 1.64
CD55-203ENST00000367063 DDX46Q7L014 1031 aaKnown RBP25.28■■□□□ 1.64
CD55-203ENST00000367063 ATP8B2P98198 1209 aa25.27■■□□□ 1.64
CD55-203ENST00000367063 IFIT5Q13325 482 aaKnown RBP25.27■■□□□ 1.64
CD55-203ENST00000367063 MTX1Q13505 466 aa25.27■■□□□ 1.64
CD55-203ENST00000367063 RPAP2Q8IXW5 612 aaPredicted RBP25.27■■□□□ 1.64
CD55-203ENST00000367063 PCDHB15Q9Y5E8 787 aa25.27■■□□□ 1.64
CD55-203ENST00000367063 PNMA6EA0A0J9YXQ4 647 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 NPR1P16066 1061 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 ZNF622Q969S3 477 aaKnown RBP eCLIP25.26■■□□□ 1.633e-8■□□□□ 10.7
CD55-203ENST00000367063 MASTLQ96GX5 879 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
CD55-203ENST00000367063 FHDC1Q9C0D6 1143 aaPredicted RBP25.26■■□□□ 1.63
CD55-203ENST00000367063 SEC31BQ9NQW1 1179 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 SRCAPQ6ZRS2 3230 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 RTL9Q8NET4 1388 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 A0A0G2JLW4 131 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 ANKRD18BA2A2Z9 1011 aa25.26■■□□□ 1.63
CD55-203ENST00000367063 LRP5O75197 1615 aa25.25■■□□□ 1.63
CD55-203ENST00000367063 DPEP1P16444 411 aa25.25■■□□□ 1.63
CD55-203ENST00000367063 HOXA10P31260 410 aaPredicted RBP25.24■■□□□ 1.63
CD55-203ENST00000367063 TAF1P21675 1872 aa25.24■■□□□ 1.63
CD55-203ENST00000367063 TAF7LQ5H9L4 462 aa25.23■■□□□ 1.63
CD55-203ENST00000367063 STYK1Q6J9G0 422 aa25.23■■□□□ 1.63
CD55-203ENST00000367063 SIRT2Q8IXJ6 389 aa25.23■■□□□ 1.63
CD55-203ENST00000367063 CDC5LQ99459 802 aaKnown RBP25.23■■□□□ 1.63
CD55-203ENST00000367063 KIAA1551Q9HCM1 1747 aa25.23■■□□□ 1.63
CD55-203ENST00000367063 DLEC1Q9Y238 1755 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 ALDH1B1P30837 517 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 GRAPQ13588 217 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 NLGN2Q8NFZ4 835 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
CD55-203ENST00000367063 SSH3Q8TE77 659 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 CELF1Q92879 486 aaKnown RBP25.22■■□□□ 1.63
CD55-203ENST00000367063 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
CD55-203ENST00000367063 HMMRO75330 724 aa25.21■■□□□ 1.63
CD55-203ENST00000367063 KCNA3P22001 575 aa25.21■■□□□ 1.63
CD55-203ENST00000367063 RFX5P48382 616 aaPredicted RBP25.21■■□□□ 1.63
CD55-203ENST00000367063 POLA2Q14181 598 aa25.21■■□□□ 1.63
CD55-203ENST00000367063 ANKRD18AQ8IVF6 992 aa25.21■■□□□ 1.63
CD55-203ENST00000367063 KLHDC4Q8TBB5 520 aa25.21■■□□□ 1.63
CD55-203ENST00000367063 ZNF594Q96JF6 807 aaPredicted RBP25.21■■□□□ 1.63
CD55-203ENST00000367063 CNKSR1Q969H4 720 aa25.2■■□□□ 1.63
CD55-203ENST00000367063 COL4A1P02462 1669 aa25.2■■□□□ 1.62
CD55-203ENST00000367063 IGHMBP2P38935 993 aaKnown RBP25.2■■□□□ 1.62
CD55-203ENST00000367063 RPS8P62241 208 aaKnown RBP25.2■■□□□ 1.62
CD55-203ENST00000367063 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
CD55-203ENST00000367063 CACNA1SQ13698 1873 aa25.19■■□□□ 1.62
CD55-203ENST00000367063 PTPN12Q05209 780 aaKnown RBP25.19■■□□□ 1.62
CD55-203ENST00000367063 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
CD55-203ENST00000367063 MPHOSPH8Q99549 860 aa25.18■■□□□ 1.62
CD55-203ENST00000367063 PIM2Q9P1W9 311 aa25.18■■□□□ 1.62
CD55-203ENST00000367063 PA2G4Q9UQ80 394 aaKnown RBP25.18■■□□□ 1.62
CD55-203ENST00000367063 ERICH6BQ5W0A0 696 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 SIL1Q9H173 461 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 WWC3Q9ULE0 1092 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 BBOX1O75936 387 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 PRPF40BQ6NWY9 871 aaKnown RBP25.17■■□□□ 1.62
CD55-203ENST00000367063 LDHAL6AQ6ZMR3 332 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 TTLL6Q8N841 843 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 COPRSQ9NQ92 184 aa25.17■■□□□ 1.62
CD55-203ENST00000367063 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
CD55-203ENST00000367063 CNNM1Q9NRU3 951 aa25.15■■□□□ 1.62
CD55-203ENST00000367063 BRCA1P38398 1863 aaKnown RBP25.15■■□□□ 1.62
CD55-203ENST00000367063 SLX4Q8IY92 1834 aa25.14■■□□□ 1.62
CD55-203ENST00000367063 SURF6O75683 361 aaKnown RBP25.14■■□□□ 1.62
CD55-203ENST00000367063 HDAC1Q13547 482 aaPredicted RBP25.14■■□□□ 1.62
CD55-203ENST00000367063 PUS3Q9BZE2 481 aaKnown RBP25.14■■□□□ 1.62
CD55-203ENST00000367063 RWDD1Q9H446 243 aaPredicted RBP25.14■■□□□ 1.62
CD55-203ENST00000367063 BSDC1Q9NW68 430 aaPredicted RBP25.14■■□□□ 1.62
CD55-203ENST00000367063 LRRC24Q50LG9 513 aa25.13■■□□□ 1.61
CD55-203ENST00000367063 DALRD3Q5D0E6 543 aaKnown RBP25.13■■□□□ 1.61
CD55-203ENST00000367063 EYA2O00167 538 aa25.12■■□□□ 1.61
CD55-203ENST00000367063 TMC4Q7Z404 712 aa25.12■■□□□ 1.61
CD55-203ENST00000367063 EXOC6BQ9Y2D4 811 aa25.12■■□□□ 1.61
CD55-203ENST00000367063 GOLGB1Q14789 3259 aaKnown RBP25.12■■□□□ 1.61
CD55-203ENST00000367063 IGHDP01880 384 aa25.11■■□□□ 1.61
CD55-203ENST00000367063 G3BP1Q13283 466 aaKnown RBP eCLIP25.11■■□□□ 1.61
CD55-203ENST00000367063 ZNF219Q9P2Y4 722 aaPredicted RBP25.11■■□□□ 1.61
CD55-203ENST00000367063 FBXO3Q9UK99 471 aa25.11■■□□□ 1.61
CD55-203ENST00000367063 NOP58Q9Y2X3 529 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms