RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MAP3K2Q9Y2U5 619 aa21.59■■□□□ 1.05
PDLIM7-201ENST00000355572 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-201ENST00000355572 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-201ENST00000355572 PI4KAP2A4QPH2 592 aa21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 DDX46Q7L014 1031 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 SP8Q8IXZ3 490 aa21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 PI4KAP1Q8N8J0 262 aa21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 TAF1DQ9H5J8 278 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 SEC31BQ9NQW1 1179 aa21.57■■□□□ 1.04
PDLIM7-201ENST00000355572 VAMP4O75379 141 aa21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 LARGE2Q8N3Y3 721 aa21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 ZBTB38Q8NAP3 1195 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 RTFDC1Q9BY42 306 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 SCN9AQ15858 1988 aa21.56■■□□□ 1.04
PDLIM7-201ENST00000355572 BBOX1O75936 387 aa21.55■■□□□ 1.04
PDLIM7-201ENST00000355572 CWF19L2Q2TBE0 894 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-201ENST00000355572 KSR2Q6VAB6 950 aa21.55■■□□□ 1.04
PDLIM7-201ENST00000355572 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
PDLIM7-201ENST00000355572 PPIP5K2O43314 1243 aa21.54■■□□□ 1.04
PDLIM7-201ENST00000355572 SLC4A2P04920 1241 aa21.54■■□□□ 1.04
PDLIM7-201ENST00000355572 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-201ENST00000355572 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
PDLIM7-201ENST00000355572 CCDC85AQ96PX6 553 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-201ENST00000355572 MPNDQ8N594 471 aa21.53■■□□□ 1.04
PDLIM7-201ENST00000355572 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
PDLIM7-201ENST00000355572 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-201ENST00000355572 CWC25Q9NXE8 425 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-201ENST00000355572 GJA3Q9Y6H8 435 aa21.53■■□□□ 1.04
PDLIM7-201ENST00000355572 SCNN1DP51172 638 aa21.52■■□□□ 1.04
PDLIM7-201ENST00000355572 DPP8Q6V1X1 898 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-201ENST00000355572 YDJCA8MPS7 323 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 GPSM2P81274 684 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 FLIIQ13045 1269 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 CHADLQ6NUI6 762 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 GPC2Q8N158 579 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 STK31Q9BXU1 1019 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
PDLIM7-201ENST00000355572 ZNF646O15015 1829 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 NEURL1BA8MQ27 555 aa21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 DDX58O95786 925 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 EPHX2P34913 555 aa21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 NIM1KQ8IY84 436 aa21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 POLLQ9UGP5 575 aa21.5■■□□□ 1.03
PDLIM7-201ENST00000355572 A0A1B0GUL6 1792 aa21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 EPS15P42566 896 aa21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 EIF6P56537 245 aaKnown RBP21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 CXCL9Q07325 125 aa21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 KIAA2012Q0VF49 1180 aa21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 EAPPQ56P03 285 aaPredicted RBP21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
PDLIM7-201ENST00000355572 PSME4Q14997 1843 aa21.48■■□□□ 1.03
PDLIM7-201ENST00000355572 IQCA1LA6NCM1 817 aa21.48■■□□□ 1.03
PDLIM7-201ENST00000355572 WTIPA6NIX2 430 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-201ENST00000355572 PDE8AO60658 829 aa21.48■■□□□ 1.03
PDLIM7-201ENST00000355572 SHTN1A0MZ66 631 aa21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 F6X3S4 739 aa21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 ITGBL1O95965 494 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 KLRG1Q96E93 195 aa21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
PDLIM7-201ENST00000355572 CASP7P55210 303 aa21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 FMR1Q06787 632 aaKnown RBP eCLIP21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 LDHDQ86WU2 507 aa21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 KCNQ5Q9NR82 932 aa21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 NSFL1CQ9UNZ2 370 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-201ENST00000355572 H7C1W4 665 aa21.45■■□□□ 1.02
PDLIM7-201ENST00000355572 RAD17O75943 681 aa21.45■■□□□ 1.02
PDLIM7-201ENST00000355572 CTSWP56202 376 aa21.45■■□□□ 1.02
PDLIM7-201ENST00000355572 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
PDLIM7-201ENST00000355572 SUPT20HQ8NEM7 779 aa21.45■■□□□ 1.02
PDLIM7-201ENST00000355572 TRPM7Q96QT4 1865 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 RIMBP2O15034 1052 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 MAP1SQ66K74 1059 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 TMC4Q7Z404 712 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 VPS33BQ9H267 617 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 DBNDD1Q9H9R9 158 aa21.44■■□□□ 1.02
PDLIM7-201ENST00000355572 GCKRQ14397 625 aa21.43■■□□□ 1.02
PDLIM7-201ENST00000355572 TBC1D16Q8TBP0 767 aa21.43■■□□□ 1.02
PDLIM7-201ENST00000355572 TMX4Q9H1E5 349 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-201ENST00000355572 GREM2Q9H772 168 aa21.43■■□□□ 1.02
PDLIM7-201ENST00000355572 POLR2AP24928 1970 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-201ENST00000355572 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-201ENST00000355572 CCDC152Q4G0S7 254 aa21.42■■□□□ 1.02
PDLIM7-201ENST00000355572 RTL9Q8NET4 1388 aa21.42■■□□□ 1.02
PDLIM7-201ENST00000355572 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
PDLIM7-201ENST00000355572 NEXNQ0ZGT2 675 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 DOK7Q18PE1 504 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 MYH16Q9H6N6 1097 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 GPRC5DQ9NZD1 345 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 CLEC11AQ9Y240 323 aa21.41■■□□□ 1.02
PDLIM7-201ENST00000355572 C6orf229H3BNL8 230 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms