RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 LRRC27Q9C0I9 530 aa9.71□□□□□ -0.86
PRDM2-203ENST00000343137 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.86
PRDM2-203ENST00000343137 HOXB7P09629 217 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 PAFAH1B1P43034 410 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 TERF1P54274 439 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 ZRSR2Q15696 482 aaKnown RBP9.7□□□□□ -0.86
PRDM2-203ENST00000343137 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 RUFY3Q7L099 469 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 UBE3BQ7Z3V4 1068 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.7□□□□□ -0.862e-7■■■□□ 16.5
PRDM2-203ENST00000343137 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 AK2P54819 239 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 SPAG1Q07617 926 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.7□□□□□ -0.86
PRDM2-203ENST00000343137 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
PRDM2-203ENST00000343137 USP5P45974 858 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 NLRP5P59047 1200 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 TYRO3Q06418 890 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 MFSD6Q6ZSS7 791 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 PRM3Q9NNZ6 103 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 KRT222Q8N1A0 295 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 NECAB1Q8N987 351 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 ALS2CR12Q96Q35 445 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 DNAJC5BQ9UF47 199 aa9.7□□□□□ -0.86
PRDM2-203ENST00000343137 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 MKNK2Q9HBH9 465 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 DACT1Q9NYF0 836 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 SSBP05455 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 NMIQ13287 307 aaPredicted RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 Q6ZUG5 572 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 CACNA2D4Q7Z3S7 1137 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 GTPBP4Q9BZE4 634 aaKnown RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 KLF18A0A0U1RQI7 1052 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 ERICH4A6NGS2 130 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 SKILP12757 684 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 FAM193AP78312 1265 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 MICALCLQ6ZW33 695 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 CCDC186Q7Z3E2 898 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 BRAPQ7Z569 592 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 UBASH3AP57075 661 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
PRDM2-203ENST00000343137 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 KIAA0232Q92628 1395 aa9.69□□□□□ -0.86
PRDM2-203ENST00000343137 RANBP6O60518 1105 aaKnown RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 IL13P35225 146 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 LDHAL6AQ6ZMR3 332 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 ZNF444Q8N0Y2 327 aaPredicted RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 ZBTB43O43298 467 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 CKAP4Q07065 602 aaKnown RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 TCP11L1Q9NUJ3 509 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 SSH2Q76I76 1423 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 DZIP1Q86YF9 867 aaKnown RBP9.68□□□□□ -0.86
PRDM2-203ENST00000343137 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 BIN1O00499 593 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 ZNF76P36508 570 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 PDE4BQ07343 736 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 CALML4Q96GE6 196 aa9.68□□□□□ -0.86
PRDM2-203ENST00000343137 ZGPATQ8N5A5 531 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 ALG1Q9BT22 464 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SLC26A6Q9BXS9 759 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 FOXO3O43524 673 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SEPT7Q16181 437 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SKIDA1Q1XH10 827 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SPTY2D1Q68D10 685 aaPredicted RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 LDHCP07864 332 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 CETN2P41208 172 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 DDX46Q7L014 1031 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 CHL1O00533 1208 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 GNG11P61952 73 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 WTAPQ15007 396 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 DHX32Q7L7V1 743 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
PRDM2-203ENST00000343137 ZBTB3Q9H5J0 574 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 PAG1Q9NWQ8 432 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 TTC37Q6PGP7 1564 aa9.67□□□□□ -0.86
PRDM2-203ENST00000343137 RNF113AO15541 343 aaKnown RBP9.66□□□□□ -0.86
PRDM2-203ENST00000343137 MICU3Q86XE3 530 aa9.66□□□□□ -0.86
PRDM2-203ENST00000343137 CCDC94Q9BW85 323 aaPredicted RBP9.66□□□□□ -0.86
PRDM2-203ENST00000343137 DNAJC25Q9H1X3 360 aa9.66□□□□□ -0.86
PRDM2-203ENST00000343137 CENPHQ9H3R5 247 aa9.66□□□□□ -0.86
PRDM2-203ENST00000343137 SPTLC2O15270 562 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms