RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 FOXO4P98177 505 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
LRRC28-202ENST00000331450 STYK1Q6J9G0 422 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 NPR1P16066 1061 aa20.2■□□□□ 0.82
LRRC28-202ENST00000331450 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
LRRC28-202ENST00000331450 ITPRIPQ8IWB1 547 aa20.2■□□□□ 0.82
LRRC28-202ENST00000331450 SRCAPQ6ZRS2 3230 aa20.2■□□□□ 0.82
LRRC28-202ENST00000331450 CSF1RP07333 972 aa20.19■□□□□ 0.82
LRRC28-202ENST00000331450 UBTFL1P0CB47 393 aaPredicted RBP20.19■□□□□ 0.82
LRRC28-202ENST00000331450 TTLL11Q8NHH1 800 aa20.19■□□□□ 0.82
LRRC28-202ENST00000331450 MASTLQ96GX5 879 aa20.19■□□□□ 0.82
LRRC28-202ENST00000331450 COG6Q9Y2V7 657 aa20.19■□□□□ 0.82
LRRC28-202ENST00000331450 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
LRRC28-202ENST00000331450 ZBTB7BO15156 539 aaPredicted RBP20.18■□□□□ 0.82
LRRC28-202ENST00000331450 GNAI3P08754 354 aa20.18■□□□□ 0.82
LRRC28-202ENST00000331450 RABL6Q3YEC7 729 aaPredicted RBP20.18■□□□□ 0.82
LRRC28-202ENST00000331450 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
LRRC28-202ENST00000331450 ANKRD44Q8N8A2 993 aa20.17■□□□□ 0.82
LRRC28-202ENST00000331450 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
LRRC28-202ENST00000331450 LTBP1Q14766 1721 aa20.16■□□□□ 0.82
LRRC28-202ENST00000331450 FER1L6Q2WGJ9 1857 aa20.16■□□□□ 0.82
LRRC28-202ENST00000331450 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
LRRC28-202ENST00000331450 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
LRRC28-202ENST00000331450 PIM2Q9P1W9 311 aa20.16■□□□□ 0.82
LRRC28-202ENST00000331450 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
LRRC28-202ENST00000331450 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
LRRC28-202ENST00000331450 ZNF622Q969S3 477 aaKnown RBP eCLIP20.15■□□□□ 0.82
LRRC28-202ENST00000331450 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
LRRC28-202ENST00000331450 GREM2Q9H772 168 aa20.15■□□□□ 0.82
LRRC28-202ENST00000331450 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
LRRC28-202ENST00000331450 FAM161AQ3B820 660 aa20.14■□□□□ 0.81
LRRC28-202ENST00000331450 LMBR1LQ6UX01 489 aa20.14■□□□□ 0.81
LRRC28-202ENST00000331450 TTLL6Q8N841 843 aa20.14■□□□□ 0.81
LRRC28-202ENST00000331450 HDAC5Q9UQL6 1122 aa20.14■□□□□ 0.81
LRRC28-202ENST00000331450 SNED1Q8TER0 1413 aa20.13■□□□□ 0.81
LRRC28-202ENST00000331450 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
LRRC28-202ENST00000331450 GRAPQ13588 217 aa20.13■□□□□ 0.81
LRRC28-202ENST00000331450 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
LRRC28-202ENST00000331450 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
LRRC28-202ENST00000331450 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
LRRC28-202ENST00000331450 CCDC85AQ96PX6 553 aaPredicted RBP20.13■□□□□ 0.81
LRRC28-202ENST00000331450 SEC31BQ9NQW1 1179 aa20.13■□□□□ 0.81
LRRC28-202ENST00000331450 GNAI2P04899 355 aa20.12■□□□□ 0.81
LRRC28-202ENST00000331450 DALRD3Q5D0E6 543 aaKnown RBP20.12■□□□□ 0.81
LRRC28-202ENST00000331450 CELF1Q92879 486 aaKnown RBP20.12■□□□□ 0.81
LRRC28-202ENST00000331450 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
LRRC28-202ENST00000331450 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
LRRC28-202ENST00000331450 MTX1Q13505 466 aa20.11■□□□□ 0.81
LRRC28-202ENST00000331450 WWC3Q9ULE0 1092 aa20.11■□□□□ 0.81
LRRC28-202ENST00000331450 DUOX1Q9NRD9 1551 aa20.1■□□□□ 0.81
LRRC28-202ENST00000331450 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■□□ 17.7
LRRC28-202ENST00000331450 ITGA6P23229 1130 aa20.1■□□□□ 0.81
LRRC28-202ENST00000331450 C7orf43Q8WVR3 580 aa20.1■□□□□ 0.81
LRRC28-202ENST00000331450 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
LRRC28-202ENST00000331450 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
LRRC28-202ENST00000331450 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
LRRC28-202ENST00000331450 BCS1LQ9Y276 419 aa20.09■□□□□ 0.81
LRRC28-202ENST00000331450 SBF1O95248 1867 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 ANKRD18BA2A2Z9 1011 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 PPEF1O14829 653 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-202ENST00000331450 BBOX1O75936 387 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
LRRC28-202ENST00000331450 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
LRRC28-202ENST00000331450 TMC4Q7Z404 712 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 C1orf115Q9H7X2 142 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 CHMP3Q9Y3E7 222 aa20.08■□□□□ 0.81
LRRC28-202ENST00000331450 RFX5P48382 616 aaPredicted RBP20.07■□□□□ 0.8
LRRC28-202ENST00000331450 ATP6V0A2Q9Y487 856 aa20.07■□□□□ 0.8
LRRC28-202ENST00000331450 CCDC88AQ3V6T2 1871 aa20.07■□□□□ 0.8
LRRC28-202ENST00000331450 CCDC57Q2TAC2 916 aa20.06■□□□□ 0.8
LRRC28-202ENST00000331450 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
LRRC28-202ENST00000331450 PNMA6EA0A0J9YXQ4 647 aa20.05■□□□□ 0.8
LRRC28-202ENST00000331450 C21orf2O43822 256 aa20.05■□□□□ 0.8
LRRC28-202ENST00000331450 CEP85Q6P2H3 762 aa20.05■□□□□ 0.8
LRRC28-202ENST00000331450 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
LRRC28-202ENST00000331450 SP8Q8IXZ3 490 aa20.05■□□□□ 0.8
LRRC28-202ENST00000331450 DICER1Q9UPY3 1922 aaKnown RBP20.05■□□□□ 0.8
LRRC28-202ENST00000331450 ZNF594Q96JF6 807 aaPredicted RBP20.04■□□□□ 0.8
LRRC28-202ENST00000331450 BSDC1Q9NW68 430 aaPredicted RBP20.04■□□□□ 0.8
LRRC28-202ENST00000331450 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
LRRC28-202ENST00000331450 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
LRRC28-202ENST00000331450 ATP8B2P98198 1209 aa20.03■□□□□ 0.8
LRRC28-202ENST00000331450 PTPN12Q05209 780 aaKnown RBP20.03■□□□□ 0.8
LRRC28-202ENST00000331450 POLA2Q14181 598 aa20.03■□□□□ 0.8
LRRC28-202ENST00000331450 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
LRRC28-202ENST00000331450 CC2D2BQ6DHV5 1058 aa20.03■□□□□ 0.8
LRRC28-202ENST00000331450 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
LRRC28-202ENST00000331450 GPR162Q16538 588 aa20.02■□□□□ 0.8
LRRC28-202ENST00000331450 CCDC93Q567U6 631 aa20.02■□□□□ 0.8
LRRC28-202ENST00000331450 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.8
LRRC28-202ENST00000331450 SSH3Q8TE77 659 aa20.02■□□□□ 0.8
LRRC28-202ENST00000331450 ZNF219Q9P2Y4 722 aaPredicted RBP20.02■□□□□ 0.8
LRRC28-202ENST00000331450 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.79
LRRC28-202ENST00000331450 ARAP2Q8WZ64 1704 aa20.02■□□□□ 0.79
LRRC28-202ENST00000331450 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
LRRC28-202ENST00000331450 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
LRRC28-202ENST00000331450 CHD4Q14839 1912 aa20.01■□□□□ 0.79
LRRC28-202ENST00000331450 LTBP3Q9NS15 1303 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms