RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SF3B2-201ENST00000322535 LRMPQ12912 555 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
SF3B2-201ENST00000322535 RAD50Q92878 1312 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 MAP3K5Q99683 1374 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 A0A0G2JS52 829 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 UBAP1LF5GYI3 381 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
SF3B2-201ENST00000322535 TEFQ10587 303 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
SF3B2-201ENST00000322535 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
SF3B2-201ENST00000322535 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
SF3B2-201ENST00000322535 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
SF3B2-201ENST00000322535 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 CRB1P82279 1406 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
SF3B2-201ENST00000322535 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
SF3B2-201ENST00000322535 ELF2Q15723 593 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
SF3B2-201ENST00000322535 FBXO38Q6PIJ6 1188 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 KIF1AQ12756 1690 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 ALS2Q96Q42 1657 aa12.15□□□□□ -0.46
SF3B2-201ENST00000322535 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 KDM4AO75164 1064 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 ZNF397Q8NF99 534 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 RABEP1Q15276 862 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 TTC31Q49AM3 519 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 CREBRFQ8IUR6 639 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 ITFG2Q969R8 447 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 ZNF215Q9UL58 517 aaPredicted RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 RPS6KL1Q9Y6S9 549 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 SLIT3O75094 1523 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 AP5Z1O43299 807 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
SF3B2-201ENST00000322535 CWC22Q9HCG8 908 aaKnown RBP12.14□□□□□ -0.47
SF3B2-201ENST00000322535 KLHL33A6NCF5 533 aa12.13□□□□□ -0.47
SF3B2-201ENST00000322535 TATP17735 454 aaPredicted RBP12.13□□□□□ -0.47
SF3B2-201ENST00000322535 SRLQ86TD4 932 aa12.13□□□□□ -0.47
SF3B2-201ENST00000322535 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
SF3B2-201ENST00000322535 CCT2P78371 535 aaKnown RBP12.13□□□□□ -0.47
SF3B2-201ENST00000322535 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
SF3B2-201ENST00000322535 KIF24Q5T7B8 1368 aa12.13□□□□□ -0.47
SF3B2-201ENST00000322535 CYP27B1O15528 508 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 NUCB1Q02818 461 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 HDAC1Q13547 482 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-201ENST00000322535 C11orf91Q3C1V1 193 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
SF3B2-201ENST00000322535 MAP2K2P36507 400 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
SF3B2-201ENST00000322535 MEGF6O75095 1541 aa12.12□□□□□ -0.47
SF3B2-201ENST00000322535 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 ST18O60284 1047 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 SYCP1Q15431 976 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 UVSSAQ2YD98 709 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 AKAP4Q5JQC9 854 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 GIMAP6Q6P9H5 292 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
SF3B2-201ENST00000322535 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
SF3B2-201ENST00000322535 SCP2P22307 547 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
SF3B2-201ENST00000322535 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
SF3B2-201ENST00000322535 ZSCAN26Q16670 478 aa12.1□□□□□ -0.47
SF3B2-201ENST00000322535 ANKRD20A12PQ8NF67 263 aa12.1□□□□□ -0.47
SF3B2-201ENST00000322535 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
SF3B2-201ENST00000322535 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
SF3B2-201ENST00000322535 ST5P78524 1137 aa12.1□□□□□ -0.47
SF3B2-201ENST00000322535 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
SF3B2-201ENST00000322535 CDC45O75419 566 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
SF3B2-201ENST00000322535 HDGFL1Q5TGJ6 251 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 ROBO1Q9Y6N7 1651 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 H0YHG0 523 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 PHKG2P15735 406 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 SARNPP82979 210 aaKnown RBP12.09□□□□□ -0.47
SF3B2-201ENST00000322535 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
SF3B2-201ENST00000322535 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
SF3B2-201ENST00000322535 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
SF3B2-201ENST00000322535 APBB1O00213 710 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 CAND2O75155 1236 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 TEX35Q5T0J7 233 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 MCTP2Q6DN12 878 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
SF3B2-201ENST00000322535 MAFGO15525 162 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms