RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CCDC191Q8NCU4 936 aa22.85■■□□□ 1.25
TPM1-203ENST00000317516 MYD88Q99836 296 aa22.85■■□□□ 1.25
TPM1-203ENST00000317516 RTFDC1Q9BY42 306 aaPredicted RBP22.85■■□□□ 1.25
TPM1-203ENST00000317516 GJA3Q9Y6H8 435 aa22.85■■□□□ 1.25
TPM1-203ENST00000317516 EPHX2P34913 555 aa22.84■■□□□ 1.25
TPM1-203ENST00000317516 EAPPQ56P03 285 aaPredicted RBP22.84■■□□□ 1.25
TPM1-203ENST00000317516 RTL5Q5HYW3 569 aaPredicted RBP22.84■■□□□ 1.25
TPM1-203ENST00000317516 LMOD1P29536 600 aaPredicted RBP22.83■■□□□ 1.25
TPM1-203ENST00000317516 AOC3Q16853 763 aa22.83■■□□□ 1.25
TPM1-203ENST00000317516 TWISTNBQ3B726 338 aaPredicted RBP22.83■■□□□ 1.25
TPM1-203ENST00000317516 METTL22Q9BUU2 404 aaPredicted RBP22.83■■□□□ 1.25
TPM1-203ENST00000317516 CLEC11AQ9Y240 323 aa22.83■■□□□ 1.25
TPM1-203ENST00000317516 POTEIP0CG38 1075 aa22.82■■□□□ 1.24
TPM1-203ENST00000317516 POTEJP0CG39 1038 aa22.82■■□□□ 1.24
TPM1-203ENST00000317516 WDR63Q8IWG1 891 aa22.82■■□□□ 1.24
TPM1-203ENST00000317516 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
TPM1-203ENST00000317516 KSR2Q6VAB6 950 aa22.81■■□□□ 1.24
TPM1-203ENST00000317516 ZNRF3Q9ULT6 936 aa22.81■■□□□ 1.24
TPM1-203ENST00000317516 PCCAP05165 728 aaPredicted RBP22.8■■□□□ 1.24
TPM1-203ENST00000317516 NEXNQ0ZGT2 675 aa22.8■■□□□ 1.24
TPM1-203ENST00000317516 SLC51AQ86UW1 340 aa22.8■■□□□ 1.24
TPM1-203ENST00000317516 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
TPM1-203ENST00000317516 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
TPM1-203ENST00000317516 KIAA2012Q0VF49 1180 aa22.79■■□□□ 1.24
TPM1-203ENST00000317516 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
TPM1-203ENST00000317516 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
TPM1-203ENST00000317516 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
TPM1-203ENST00000317516 RPS8P62241 208 aaKnown RBP22.78■■□□□ 1.24
TPM1-203ENST00000317516 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
TPM1-203ENST00000317516 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
TPM1-203ENST00000317516 CELF1Q92879 486 aaKnown RBP22.78■■□□□ 1.24
TPM1-203ENST00000317516 NSFL1CQ9UNZ2 370 aaKnown RBP22.78■■□□□ 1.24
TPM1-203ENST00000317516 PDE8AO60658 829 aa22.77■■□□□ 1.24
TPM1-203ENST00000317516 CCDC152Q4G0S7 254 aa22.77■■□□□ 1.24
TPM1-203ENST00000317516 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
TPM1-203ENST00000317516 CREBZFQ9NS37 354 aa22.77■■□□□ 1.24
TPM1-203ENST00000317516 TNIP1Q15025 636 aa22.76■■□□□ 1.23
TPM1-203ENST00000317516 CXCL9Q07325 125 aa22.75■■□□□ 1.23
TPM1-203ENST00000317516 WASHC4Q2M389 1173 aa22.75■■□□□ 1.23
TPM1-203ENST00000317516 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
TPM1-203ENST00000317516 SCN4AP35499 1836 aa22.75■■□□□ 1.23
TPM1-203ENST00000317516 C6orf229H3BNL8 230 aa22.74■■□□□ 1.23
TPM1-203ENST00000317516 SCNN1DP51172 638 aa22.74■■□□□ 1.23
TPM1-203ENST00000317516 CIAPIN1Q6FI81 312 aa22.74■■□□□ 1.23
TPM1-203ENST00000317516 USP50Q70EL3 339 aaPredicted RBP22.74■■□□□ 1.23
TPM1-203ENST00000317516 CNTROBQ8N137 903 aa22.74■■□□□ 1.23
TPM1-203ENST00000317516 EYA3Q99504 573 aa22.74■■□□□ 1.23
TPM1-203ENST00000317516 ITGBL1O95965 494 aaPredicted RBP22.73■■□□□ 1.23
TPM1-203ENST00000317516 EPS15P42566 896 aa22.73■■□□□ 1.23
TPM1-203ENST00000317516 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
TPM1-203ENST00000317516 COL4A5P29400 1685 aa22.72■■□□□ 1.23
TPM1-203ENST00000317516 JARID2Q92833 1246 aaPredicted RBP22.72■■□□□ 1.23
TPM1-203ENST00000317516 MYH16Q9H6N6 1097 aa22.72■■□□□ 1.23
TPM1-203ENST00000317516 CDHR2Q9BYE9 1310 aa22.72■■□□□ 1.23
TPM1-203ENST00000317516 VAMP4O75379 141 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 IGKV5-2P06315 115 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 GPSM2P81274 684 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 FLIIQ13045 1269 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 MAP1SQ66K74 1059 aaPredicted RBP22.71■■□□□ 1.23
TPM1-203ENST00000317516 G2E3Q7L622 706 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 BCL2L13Q9BXK5 485 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 SEC31BQ9NQW1 1179 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 ADARB2Q9NS39 739 aaKnown RBP22.71■■□□□ 1.23
TPM1-203ENST00000317516 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
TPM1-203ENST00000317516 TMEM88BA6NKF7 163 aa22.7■■□□□ 1.22
TPM1-203ENST00000317516 RAD17O75943 681 aa22.7■■□□□ 1.22
TPM1-203ENST00000317516 EXOSC9Q06265 439 aaKnown RBP22.7■■□□□ 1.22
TPM1-203ENST00000317516 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
TPM1-203ENST00000317516 NEURL1BA8MQ27 555 aa22.69■■□□□ 1.22
TPM1-203ENST00000317516 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
TPM1-203ENST00000317516 ANKRD18AQ8IVF6 992 aa22.69■■□□□ 1.22
TPM1-203ENST00000317516 ZC3H12CQ9C0D7 883 aaKnown RBP22.69■■□□□ 1.22
TPM1-203ENST00000317516 PODXL2Q9NZ53 605 aa22.69■■□□□ 1.22
TPM1-203ENST00000317516 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
TPM1-203ENST00000317516 POLLQ9UGP5 575 aa22.69■■□□□ 1.22
TPM1-203ENST00000317516 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
TPM1-203ENST00000317516 CWF19L2Q2TBE0 894 aaKnown RBP22.68■■□□□ 1.22
TPM1-203ENST00000317516 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
TPM1-203ENST00000317516 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
TPM1-203ENST00000317516 CDC5LQ99459 802 aaKnown RBP22.68■■□□□ 1.22
TPM1-203ENST00000317516 G3V3G9 751 aa22.67■■□□□ 1.22
TPM1-203ENST00000317516 CTSWP56202 376 aa22.67■■□□□ 1.22
TPM1-203ENST00000317516 DCAF8Q5TAQ9 597 aa22.67■■□□□ 1.22
TPM1-203ENST00000317516 DNAAF4Q8WXU2 420 aa22.67■■□□□ 1.22
TPM1-203ENST00000317516 LAMB2P55268 1798 aa22.67■■□□□ 1.22
TPM1-203ENST00000317516 H7C1D1 291 aa22.66■■□□□ 1.22
TPM1-203ENST00000317516 H7C1W4 665 aa22.66■■□□□ 1.22
TPM1-203ENST00000317516 DBNDD1Q9H9R9 158 aa22.66■■□□□ 1.22
TPM1-203ENST00000317516 MKRN1Q9UHC7 482 aaKnown RBP22.66■■□□□ 1.22
TPM1-203ENST00000317516 GGA1Q9UJY5 639 aa22.66■■□□□ 1.22
TPM1-203ENST00000317516 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
TPM1-203ENST00000317516 YDJCA8MPS7 323 aa22.65■■□□□ 1.22
TPM1-203ENST00000317516 GCKRQ14397 625 aa22.65■■□□□ 1.22
TPM1-203ENST00000317516 LINS1Q8NG48 757 aa22.65■■□□□ 1.22
TPM1-203ENST00000317516 TTLL11Q8NHH1 800 aa22.65■■□□□ 1.22
TPM1-203ENST00000317516 UFL1O94874 794 aa22.64■■□□□ 1.21
TPM1-203ENST00000317516 UBE3BQ7Z3V4 1068 aa22.64■■□□□ 1.21
TPM1-203ENST00000317516 DPF2Q92785 391 aa22.64■■□□□ 1.21
TPM1-203ENST00000317516 SPINK5Q9NQ38 1064 aaPredicted RBP22.64■■□□□ 1.21
TPM1-203ENST00000317516 CNOT7Q9UIV1 285 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms