RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GOLIM4O00461 696 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 LARGE1O95461 756 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 NCLP19338 710 aaKnown RBP14.94□□□□□ -0.02
RNF4-201ENST00000314289 KCNQ4P56696 695 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 CCDC57Q2TAC2 916 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 DISP2A7MBM2 1401 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 PAPPAQ13219 1627 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 NUCB2P80303 420 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 ATP5JP18859 108 aa14.93□□□□□ -0.02
RNF4-201ENST00000314289 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
RNF4-201ENST00000314289 COL16A1Q07092 1604 aaPredicted RBP14.93□□□□□ -0.02
RNF4-201ENST00000314289 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
RNF4-201ENST00000314289 EYA2O00167 538 aa14.93□□□□□ -0.02
RNF4-201ENST00000314289 CYP2E1P05181 493 aaPredicted RBP14.93□□□□□ -0.02
RNF4-201ENST00000314289 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
RNF4-201ENST00000314289 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
RNF4-201ENST00000314289 A0A1B0GUL7 405 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 KCNQ2O43526 872 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 MARCH10Q8NA82 808 aaPredicted RBP14.92□□□□□ -0.02
RNF4-201ENST00000314289 MAP3K15Q6ZN16 1313 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 NECTIN1Q15223 517 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 TEX13AQ9BXU3 409 aaPredicted RBP14.92□□□□□ -0.02
RNF4-201ENST00000314289 TJP1Q07157 1748 aa14.92□□□□□ -0.02
RNF4-201ENST00000314289 ADORA1P30542 326 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 MCM2P49736 904 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 TTC14Q96N46 770 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 DDX49Q9Y6V7 483 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 SPATA31A1Q5TZJ5 1347 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 COL14A1Q05707 1796 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 PRPF40AO75400 957 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 SMIM5Q71RC9 77 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 DZIP3Q86Y13 1208 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 TRMT112Q9UI30 125 aaKnown RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 COL15A1P39059 1388 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 IL15P40933 162 aaPredicted RBP14.91□□□□□ -0.02
RNF4-201ENST00000314289 FKBP4Q02790 459 aaKnown RBP eCLIP14.91□□□□□ -0.02
RNF4-201ENST00000314289 CUL4AQ13619 759 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 NLRP10Q86W26 655 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 MAP4K1Q92918 833 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 GREM2Q9H772 168 aa14.91□□□□□ -0.02
RNF4-201ENST00000314289 ESPNB1AK53 854 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 GOLGA6L22H0YM25 854 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 SLC27A2O14975 620 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 ATP6V1AP38606 617 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 HSP90AA2PQ14568 343 aaPredicted RBP14.9□□□□□ -0.02
RNF4-201ENST00000314289 NECAB1Q8N987 351 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 PDRG1Q9NUG6 133 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
RNF4-201ENST00000314289 PI16Q6UXB8 463 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
RNF4-201ENST00000314289 ZBTB38Q8NAP3 1195 aaPredicted RBP14.9□□□□□ -0.02
RNF4-201ENST00000314289 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
RNF4-201ENST00000314289 GLIPR1L2Q4G1C9 344 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 HAUS7Q99871 368 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 GDPD2Q9HCC8 539 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 CEP126Q9P2H0 1117 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 EP400Q96L91 3159 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 HIP1O00291 1037 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 IFIT5Q13325 482 aaKnown RBP14.89□□□□□ -0.03
RNF4-201ENST00000314289 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 GORABQ5T7V8 394 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 C8orf37Q96NL8 207 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 TAF5LO75529 589 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 PCCAP05165 728 aaPredicted RBP14.89□□□□□ -0.03
RNF4-201ENST00000314289 GAS2L3Q86XJ1 694 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 PAG1Q9NWQ8 432 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
RNF4-201ENST00000314289 ZNF609O15014 1411 aa14.88□□□□□ -0.03
RNF4-201ENST00000314289 IFIT1P09914 478 aaKnown RBP14.88□□□□□ -0.03
RNF4-201ENST00000314289 ITGA6P23229 1130 aa14.88□□□□□ -0.03
RNF4-201ENST00000314289 VPS53Q5VIR6 699 aa14.88□□□□□ -0.03
RNF4-201ENST00000314289 LIMCH1Q9UPQ0 1083 aa14.88□□□□□ -0.03
RNF4-201ENST00000314289 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
RNF4-201ENST00000314289 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
RNF4-201ENST00000314289 HCLS1P14317 486 aaPredicted RBP14.88□□□□□ -0.03
RNF4-201ENST00000314289 HELBQ8NG08 1087 aaPredicted RBP14.88□□□□□ -0.03
RNF4-201ENST00000314289 UBN2Q6ZU65 1347 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 SCARF1Q14162 830 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 PTF1AQ7RTS3 328 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 IL17RAQ96F46 866 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 MED23Q9ULK4 1368 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 SNAP23O00161 211 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
RNF4-201ENST00000314289 ITPK1Q13572 414 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 TTLL11Q8NHH1 800 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
RNF4-201ENST00000314289 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 STK3Q13188 491 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
RNF4-201ENST00000314289 XAGE2Q96GT9 111 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 LRRC2Q9BYS8 371 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 LMBRD1Q9NUN5 540 aa14.86□□□□□ -0.03
RNF4-201ENST00000314289 AHDC1Q5TGY3 1603 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms