RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 NIM1KQ8IY84 436 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 ZBTB38Q8NAP3 1195 aaPredicted RBP23.49■■□□□ 1.35
TMEM88-201ENST00000301599 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 MYD88Q99836 296 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 STK31Q9BXU1 1019 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 GJA3Q9Y6H8 435 aa23.49■■□□□ 1.35
TMEM88-201ENST00000301599 POTEIP0CG38 1075 aa23.48■■□□□ 1.35
TMEM88-201ENST00000301599 POTEJP0CG39 1038 aa23.48■■□□□ 1.35
TMEM88-201ENST00000301599 EPHX2P34913 555 aa23.48■■□□□ 1.35
TMEM88-201ENST00000301599 PNMA8AQ86V59 439 aaPredicted RBP23.48■■□□□ 1.35
TMEM88-201ENST00000301599 METTL22Q9BUU2 404 aaPredicted RBP23.48■■□□□ 1.35
TMEM88-201ENST00000301599 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
TMEM88-201ENST00000301599 EAPPQ56P03 285 aaPredicted RBP23.47■■□□□ 1.35
TMEM88-201ENST00000301599 WDR63Q8IWG1 891 aa23.47■■□□□ 1.35
TMEM88-201ENST00000301599 AOC3Q16853 763 aa23.46■■□□□ 1.35
TMEM88-201ENST00000301599 CLEC11AQ9Y240 323 aa23.46■■□□□ 1.35
TMEM88-201ENST00000301599 KSR2Q6VAB6 950 aa23.45■■□□□ 1.34
TMEM88-201ENST00000301599 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
TMEM88-201ENST00000301599 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
TMEM88-201ENST00000301599 MAP3K2Q9Y2U5 619 aa23.45■■□□□ 1.34
TMEM88-201ENST00000301599 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
TMEM88-201ENST00000301599 SCN4AP35499 1836 aa23.45■■□□□ 1.34
TMEM88-201ENST00000301599 PCCAP05165 728 aaPredicted RBP23.44■■□□□ 1.34
TMEM88-201ENST00000301599 LMOD1P29536 600 aaPredicted RBP23.44■■□□□ 1.34
TMEM88-201ENST00000301599 CELF1Q92879 486 aaKnown RBP23.44■■□□□ 1.34
TMEM88-201ENST00000301599 PI4KAP2A4QPH2 592 aa23.43■■□□□ 1.34
TMEM88-201ENST00000301599 SLC4A2P04920 1241 aa23.43■■□□□ 1.34
TMEM88-201ENST00000301599 RPS8P62241 208 aaKnown RBP23.43■■□□□ 1.34
TMEM88-201ENST00000301599 KIAA2012Q0VF49 1180 aa23.43■■□□□ 1.34
TMEM88-201ENST00000301599 PI4KAP1Q8N8J0 262 aa23.43■■□□□ 1.34
TMEM88-201ENST00000301599 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
TMEM88-201ENST00000301599 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
TMEM88-201ENST00000301599 COL4A5P29400 1685 aa23.41■■□□□ 1.34
TMEM88-201ENST00000301599 PDE8AO60658 829 aa23.41■■□□□ 1.34
TMEM88-201ENST00000301599 NEXNQ0ZGT2 675 aa23.41■■□□□ 1.34
TMEM88-201ENST00000301599 NSFL1CQ9UNZ2 370 aaKnown RBP23.41■■□□□ 1.34
TMEM88-201ENST00000301599 LAMB2P55268 1798 aa23.41■■□□□ 1.34
TMEM88-201ENST00000301599 CXCL9Q07325 125 aa23.4■■□□□ 1.34
TMEM88-201ENST00000301599 CREBZFQ9NS37 354 aa23.4■■□□□ 1.34
TMEM88-201ENST00000301599 ITGBL1O95965 494 aaPredicted RBP23.39■■□□□ 1.33
TMEM88-201ENST00000301599 SCNN1DP51172 638 aa23.39■■□□□ 1.33
TMEM88-201ENST00000301599 CCDC152Q4G0S7 254 aa23.39■■□□□ 1.33
TMEM88-201ENST00000301599 JARID2Q92833 1246 aaPredicted RBP23.39■■□□□ 1.33
TMEM88-201ENST00000301599 PASKQ96RG2 1323 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 FANCIQ9NVI1 1328 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 EPS15P42566 896 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 TNIP1Q15025 636 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 WASHC4Q2M389 1173 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 CIAPIN1Q6FI81 312 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 G2E3Q7L622 706 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 CNTROBQ8N137 903 aa23.38■■□□□ 1.33
TMEM88-201ENST00000301599 DDX60Q8IY21 1712 aaKnown RBP23.37■■□□□ 1.33
TMEM88-201ENST00000301599 C6orf229H3BNL8 230 aa23.37■■□□□ 1.33
TMEM88-201ENST00000301599 VAMP4O75379 141 aa23.37■■□□□ 1.33
TMEM88-201ENST00000301599 IGKV5-2P06315 115 aa23.37■■□□□ 1.33
TMEM88-201ENST00000301599 USP50Q70EL3 339 aaPredicted RBP23.37■■□□□ 1.33
TMEM88-201ENST00000301599 SEC31BQ9NQW1 1179 aa23.37■■□□□ 1.33
TMEM88-201ENST00000301599 CDHR2Q9BYE9 1310 aa23.36■■□□□ 1.33
TMEM88-201ENST00000301599 GPSM2P81274 684 aa23.36■■□□□ 1.33
TMEM88-201ENST00000301599 EXOSC9Q06265 439 aaKnown RBP23.36■■□□□ 1.33
TMEM88-201ENST00000301599 MAP1SQ66K74 1059 aaPredicted RBP23.35■■□□□ 1.33
TMEM88-201ENST00000301599 EYA3Q99504 573 aa23.35■■□□□ 1.33
TMEM88-201ENST00000301599 GPRC5DQ9NZD1 345 aa23.35■■□□□ 1.33
TMEM88-201ENST00000301599 POLLQ9UGP5 575 aa23.35■■□□□ 1.33
TMEM88-201ENST00000301599 TAF1P21675 1872 aa23.34■■□□□ 1.33
TMEM88-201ENST00000301599 RAD17O75943 681 aa23.34■■□□□ 1.33
TMEM88-201ENST00000301599 FLIIQ13045 1269 aa23.34■■□□□ 1.33
TMEM88-201ENST00000301599 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
TMEM88-201ENST00000301599 MYH16Q9H6N6 1097 aa23.34■■□□□ 1.33
TMEM88-201ENST00000301599 TMEM88BA6NKF7 163 aa23.33■■□□□ 1.33
TMEM88-201ENST00000301599 NEURL1BA8MQ27 555 aa23.33■■□□□ 1.33
TMEM88-201ENST00000301599 RIMBP2O15034 1052 aa23.33■■□□□ 1.33
TMEM88-201ENST00000301599 GMPSP49915 693 aaPredicted RBP23.33■■□□□ 1.33
TMEM88-201ENST00000301599 CWF19L2Q2TBE0 894 aaKnown RBP23.33■■□□□ 1.33
TMEM88-201ENST00000301599 TBC1D16Q8TBP0 767 aa23.33■■□□□ 1.33
TMEM88-201ENST00000301599 ADARB2Q9NS39 739 aaKnown RBP23.33■■□□□ 1.33
TMEM88-201ENST00000301599 PODXL2Q9NZ53 605 aa23.33■■□□□ 1.33
TMEM88-201ENST00000301599 H7C1W4 665 aa23.32■■□□□ 1.32
TMEM88-201ENST00000301599 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
TMEM88-201ENST00000301599 ANKRD18AQ8IVF6 992 aa23.32■■□□□ 1.32
TMEM88-201ENST00000301599 CCDC85AQ96PX6 553 aaPredicted RBP23.32■■□□□ 1.32
TMEM88-201ENST00000301599 ZC3H12CQ9C0D7 883 aaKnown RBP23.32■■□□□ 1.32
TMEM88-201ENST00000301599 ANKIB1Q9P2G1 1089 aa23.32■■□□□ 1.32
TMEM88-201ENST00000301599 YDJCA8MPS7 323 aa23.31■■□□□ 1.32
TMEM88-201ENST00000301599 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
TMEM88-201ENST00000301599 CTSWP56202 376 aa23.3■■□□□ 1.32
TMEM88-201ENST00000301599 TTLL11Q8NHH1 800 aa23.3■■□□□ 1.32
TMEM88-201ENST00000301599 DNAAF4Q8WXU2 420 aa23.3■■□□□ 1.32
TMEM88-201ENST00000301599 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
TMEM88-201ENST00000301599 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
TMEM88-201ENST00000301599 GCKRQ14397 625 aa23.29■■□□□ 1.32
TMEM88-201ENST00000301599 DBNDD1Q9H9R9 158 aa23.29■■□□□ 1.32
TMEM88-201ENST00000301599 CNOT7Q9UIV1 285 aaKnown RBP23.29■■□□□ 1.32
TMEM88-201ENST00000301599 GGA1Q9UJY5 639 aa23.29■■□□□ 1.32
TMEM88-201ENST00000301599 G3V3G9 751 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 H7C1D1 291 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 DOK7Q18PE1 504 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 DCAF8Q5TAQ9 597 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 UBE3BQ7Z3V4 1068 aa23.28■■□□□ 1.32
TMEM88-201ENST00000301599 LINS1Q8NG48 757 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms