RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PTPDC1A2A3K4 754 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 ZNF213O14771 459 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 MTMR6Q9Y217 621 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 TRPM2O94759 1503 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 NR1I2O75469 434 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 AIDAQ96BJ3 306 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 CLTCL1P53675 1640 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 DHX8Q14562 1220 aaKnown RBP15.51■□□□□ 0.07
CASC4-201ENST00000299957 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
CASC4-201ENST00000299957 SPECC1Q5M775 1068 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 LDHAL6AQ6ZMR3 332 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 MPHOSPH8Q99549 860 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 SSH3Q8TE77 659 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 NAP1L1P55209 391 aaKnown RBP15.5■□□□□ 0.07
CASC4-201ENST00000299957 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
CASC4-201ENST00000299957 HS1BP3Q53T59 392 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 PRIMPOLQ96LW4 560 aa15.5■□□□□ 0.07
CASC4-201ENST00000299957 MCMDC2Q4G0Z9 681 aa15.49■□□□□ 0.07
CASC4-201ENST00000299957 LRP2BPQ9P2M1 347 aa15.49■□□□□ 0.07
CASC4-201ENST00000299957 DNAI1Q9UI46 699 aa15.49■□□□□ 0.07
CASC4-201ENST00000299957 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
CASC4-201ENST00000299957 STX1AQ16623 288 aa15.49■□□□□ 0.07
CASC4-201ENST00000299957 CHGBP05060 677 aa15.49■□□□□ 0.07
CASC4-201ENST00000299957 LEO1Q8WVC0 666 aaPredicted RBP15.49■□□□□ 0.07
CASC4-201ENST00000299957 AKAP4Q5JQC9 854 aa15.48■□□□□ 0.07
CASC4-201ENST00000299957 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
CASC4-201ENST00000299957 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
CASC4-201ENST00000299957 NOC3LQ8WTT2 800 aaKnown RBP15.48■□□□□ 0.07
CASC4-201ENST00000299957 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
CASC4-201ENST00000299957 JMYQ8N9B5 988 aa15.48■□□□□ 0.07
CASC4-201ENST00000299957 CNNM3Q8NE01 707 aa15.48■□□□□ 0.07
CASC4-201ENST00000299957 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
CASC4-201ENST00000299957 IFIT3O14879 490 aaKnown RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 ZNF589Q86UQ0 364 aaPredicted RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.47■□□□□ 0.077e-14■■□□□ 14.2
CASC4-201ENST00000299957 BCL2L12Q9HB09 334 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 FAM193AP78312 1265 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 MYL10Q9BUA6 226 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 SLC26A6Q9BXS9 759 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 RAI14Q9P0K7 980 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
CASC4-201ENST00000299957 LSG1Q9H089 658 aaKnown RBP15.47■□□□□ 0.07
CASC4-201ENST00000299957 IPO7O95373 1038 aaKnown RBP15.46■□□□□ 0.07
CASC4-201ENST00000299957 A1BGP04217 495 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 SYT10Q6XYQ8 523 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 DHX37Q8IY37 1157 aaKnown RBP15.46■□□□□ 0.07
CASC4-201ENST00000299957 FAM89AQ96GI7 184 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 NAPBQ9H115 298 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 PAG1Q9NWQ8 432 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 TTC41PQ6P2S7 1318 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 SNRPA1P09661 255 aaKnown RBP15.46■□□□□ 0.07
CASC4-201ENST00000299957 GTF2F1P35269 517 aaKnown RBP eCLIP15.46■□□□□ 0.07
CASC4-201ENST00000299957 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
CASC4-201ENST00000299957 SETD1BQ9UPS6 1966 aaKnown RBP15.46■□□□□ 0.07
CASC4-201ENST00000299957 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
CASC4-201ENST00000299957 BEND3Q5T5X7 828 aa15.46■□□□□ 0.06
CASC4-201ENST00000299957 TRMT112Q9UI30 125 aaKnown RBP15.46■□□□□ 0.06
CASC4-201ENST00000299957 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 AFMP43652 599 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 DNA2P51530 1060 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 NAA30Q147X3 362 aaPredicted RBP15.45■□□□□ 0.06
CASC4-201ENST00000299957 PPFIBP1Q86W92 1011 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 UBAC1Q9BSL1 405 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 STX17P56962 302 aa15.45■□□□□ 0.06
CASC4-201ENST00000299957 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 ANKRD20A12PQ8NF67 263 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
CASC4-201ENST00000299957 GOLGA8AA7E2F4 631 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 PRC1O43663 620 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 RANBP6O60518 1105 aaKnown RBP15.44■□□□□ 0.06
CASC4-201ENST00000299957 GNG11P61952 73 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 MYRIPQ8NFW9 859 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 GTF3C6Q969F1 213 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 ZNF500O60304 480 aaPredicted RBP15.44■□□□□ 0.06
CASC4-201ENST00000299957 ARID5BQ14865 1188 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
CASC4-201ENST00000299957 MRPS27Q92552 414 aaKnown RBP15.44■□□□□ 0.06
CASC4-201ENST00000299957 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
CASC4-201ENST00000299957 ZNF790Q6PG37 636 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 GPIHBP1Q8IV16 184 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 CAGE1Q8TC20 777 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 ALG1Q9BT22 464 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
CASC4-201ENST00000299957 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 HMG20BQ9P0W2 317 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 SYKP43405 635 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 UBASH3AP57075 661 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 IP6K1Q92551 441 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms