RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
TMED3-201ENST00000299705 ANKRD44Q8N8A2 993 aa22.54■■□□□ 1.2
TMED3-201ENST00000299705 RTL9Q8NET4 1388 aa22.53■■□□□ 1.2
TMED3-201ENST00000299705 NEFLP07196 543 aa22.53■■□□□ 1.2
TMED3-201ENST00000299705 MTX1Q13505 466 aa22.53■■□□□ 1.2
TMED3-201ENST00000299705 SRGNP10124 158 aa22.52■■□□□ 1.2
TMED3-201ENST00000299705 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
TMED3-201ENST00000299705 H0YIN7 160 aa22.51■■□□□ 1.19
TMED3-201ENST00000299705 HOXA10P31260 410 aaPredicted RBP22.51■■□□□ 1.19
TMED3-201ENST00000299705 C2CD5Q86YS7 1000 aa22.51■■□□□ 1.19
TMED3-201ENST00000299705 C1orf115Q9H7X2 142 aa22.51■■□□□ 1.19
TMED3-201ENST00000299705 NPR1P16066 1061 aa22.5■■□□□ 1.19
TMED3-201ENST00000299705 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
TMED3-201ENST00000299705 RPGRQ92834 1020 aaKnown RBP22.5■■□□□ 1.19
TMED3-201ENST00000299705 ATP8B2P98198 1209 aa22.49■■□□□ 1.19
TMED3-201ENST00000299705 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
TMED3-201ENST00000299705 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
TMED3-201ENST00000299705 GREM2Q9H772 168 aa22.49■■□□□ 1.19
TMED3-201ENST00000299705 KIAA1551Q9HCM1 1747 aa22.49■■□□□ 1.19
TMED3-201ENST00000299705 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
TMED3-201ENST00000299705 STYK1Q6J9G0 422 aa22.48■■□□□ 1.19
TMED3-201ENST00000299705 CEP85Q6P2H3 762 aa22.48■■□□□ 1.19
TMED3-201ENST00000299705 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
TMED3-201ENST00000299705 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
TMED3-201ENST00000299705 CHRNA5P30532 468 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 IFIT5Q13325 482 aaKnown RBP22.47■■□□□ 1.19
TMED3-201ENST00000299705 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 CCDC85AQ96PX6 553 aaPredicted RBP22.47■■□□□ 1.19
TMED3-201ENST00000299705 FHDC1Q9C0D6 1143 aaPredicted RBP22.47■■□□□ 1.19
TMED3-201ENST00000299705 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 DLEC1Q9Y238 1755 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 DPEP1P16444 411 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 ITGA6P23229 1130 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 CCDC57Q2TAC2 916 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 KLHL34Q8N239 644 aa22.47■■□□□ 1.19
TMED3-201ENST00000299705 ANKRD18BA2A2Z9 1011 aa22.46■■□□□ 1.19
TMED3-201ENST00000299705 SRGAP3O43295 1099 aa22.46■■□□□ 1.19
TMED3-201ENST00000299705 KCNA3P22001 575 aa22.46■■□□□ 1.19
TMED3-201ENST00000299705 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
TMED3-201ENST00000299705 PNMA6EA0A0J9YXQ4 647 aa22.45■■□□□ 1.18
TMED3-201ENST00000299705 POLA2Q14181 598 aa22.45■■□□□ 1.18
TMED3-201ENST00000299705 SSH3Q8TE77 659 aa22.45■■□□□ 1.18
TMED3-201ENST00000299705 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
TMED3-201ENST00000299705 SEC31BQ9NQW1 1179 aa22.45■■□□□ 1.18
TMED3-201ENST00000299705 RFX5P48382 616 aaPredicted RBP22.44■■□□□ 1.18
TMED3-201ENST00000299705 GRAPQ13588 217 aa22.44■■□□□ 1.18
TMED3-201ENST00000299705 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
TMED3-201ENST00000299705 CNKSR1Q969H4 720 aa22.44■■□□□ 1.18
TMED3-201ENST00000299705 ZNF622Q969S3 477 aaKnown RBP eCLIP22.44■■□□□ 1.18
TMED3-201ENST00000299705 SYT17Q9BSW7 474 aa22.44■■□□□ 1.18
TMED3-201ENST00000299705 PCDHB15Q9Y5E8 787 aa22.44■■□□□ 1.18
TMED3-201ENST00000299705 SRCAPQ6ZRS2 3230 aa22.44■■□□□ 1.18
TMED3-201ENST00000299705 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
TMED3-201ENST00000299705 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
TMED3-201ENST00000299705 HMMRO75330 724 aa22.42■■□□□ 1.18
TMED3-201ENST00000299705 BBOX1O75936 387 aa22.42■■□□□ 1.18
TMED3-201ENST00000299705 RPS8P62241 208 aaKnown RBP22.42■■□□□ 1.18
TMED3-201ENST00000299705 CELF1Q92879 486 aaKnown RBP22.42■■□□□ 1.18
TMED3-201ENST00000299705 PIM2Q9P1W9 311 aa22.42■■□□□ 1.18
TMED3-201ENST00000299705 PTPN12Q05209 780 aaKnown RBP22.41■■□□□ 1.18
TMED3-201ENST00000299705 ANKRD18AQ8IVF6 992 aa22.41■■□□□ 1.18
TMED3-201ENST00000299705 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
TMED3-201ENST00000299705 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
TMED3-201ENST00000299705 IGHMBP2P38935 993 aaKnown RBP22.41■■□□□ 1.18
TMED3-201ENST00000299705 TMC4Q7Z404 712 aa22.41■■□□□ 1.18
TMED3-201ENST00000299705 COPRSQ9NQ92 184 aa22.41■■□□□ 1.18
TMED3-201ENST00000299705 TAF1P21675 1872 aa22.4■■□□□ 1.18
TMED3-201ENST00000299705 BRCA1P38398 1863 aaKnown RBP22.4■■□□□ 1.18
TMED3-201ENST00000299705 TAF7LQ5H9L4 462 aa22.4■■□□□ 1.18
TMED3-201ENST00000299705 BSDC1Q9NW68 430 aaPredicted RBP22.4■■□□□ 1.18
TMED3-201ENST00000299705 FBXO3Q9UK99 471 aa22.4■■□□□ 1.18
TMED3-201ENST00000299705 ZNF594Q96JF6 807 aaPredicted RBP22.39■■□□□ 1.17
TMED3-201ENST00000299705 COL4A1P02462 1669 aa22.38■■□□□ 1.17
TMED3-201ENST00000299705 PRPF40BQ6NWY9 871 aaKnown RBP22.38■■□□□ 1.17
TMED3-201ENST00000299705 MPHOSPH8Q99549 860 aa22.38■■□□□ 1.17
TMED3-201ENST00000299705 PPEF1O14829 653 aaPredicted RBP22.37■■□□□ 1.17
TMED3-201ENST00000299705 HDAC1Q13547 482 aaPredicted RBP22.37■■□□□ 1.17
TMED3-201ENST00000299705 DALRD3Q5D0E6 543 aaKnown RBP22.37■■□□□ 1.17
TMED3-201ENST00000299705 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
TMED3-201ENST00000299705 KLHDC4Q8TBB5 520 aa22.37■■□□□ 1.17
TMED3-201ENST00000299705 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
TMED3-201ENST00000299705 PA2G4Q9UQ80 394 aaKnown RBP22.36■■□□□ 1.17
TMED3-201ENST00000299705 SLX4Q8IY92 1834 aa22.36■■□□□ 1.17
TMED3-201ENST00000299705 EYA2O00167 538 aa22.35■■□□□ 1.17
TMED3-201ENST00000299705 CIAO1O76071 339 aa22.35■■□□□ 1.17
TMED3-201ENST00000299705 SP8Q8IXZ3 490 aa22.35■■□□□ 1.17
TMED3-201ENST00000299705 ATP6V0A2Q9Y487 856 aa22.35■■□□□ 1.17
TMED3-201ENST00000299705 C7orf43Q8WVR3 580 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
TMED3-201ENST00000299705 CNNM1Q9NRU3 951 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 RIPOR2Q9Y4F9 1068 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 CACNA1SQ13698 1873 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 SPEF2Q9C093 1822 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 SURF6O75683 361 aaKnown RBP22.34■■□□□ 1.17
TMED3-201ENST00000299705 HSP90AB4PQ58FF6 505 aa22.34■■□□□ 1.17
TMED3-201ENST00000299705 PUS3Q9BZE2 481 aaKnown RBP22.34■■□□□ 1.17
TMED3-201ENST00000299705 LRRC37AA6NMS7 1700 aa22.33■■□□□ 1.17
TMED3-201ENST00000299705 LRRC24Q50LG9 513 aa22.33■■□□□ 1.16
TMED3-201ENST00000299705 CC2D2BQ6DHV5 1058 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms