RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 SF3B3Q15393 1217 aaKnown RBP34.72■■■■□ 3.15
CHCHD4-201ENST00000295767 CCDC85AQ96PX6 553 aaPredicted RBP34.72■■■■□ 3.15
CHCHD4-201ENST00000295767 CSF1RP07333 972 aa34.71■■■■□ 3.15
CHCHD4-201ENST00000295767 CRY2Q49AN0 593 aa34.7■■■■□ 3.15
CHCHD4-201ENST00000295767 CACNA1SQ13698 1873 aa34.7■■■■□ 3.14
CHCHD4-201ENST00000295767 AAMPQ13685 434 aa34.69■■■■□ 3.14
CHCHD4-201ENST00000295767 KLHL34Q8N239 644 aa34.69■■■■□ 3.14
CHCHD4-201ENST00000295767 PPP1R1BQ9UD71 204 aaPredicted RBP34.69■■■■□ 3.14
CHCHD4-201ENST00000295767 CHMP3Q9Y3E7 222 aa34.69■■■■□ 3.14
CHCHD4-201ENST00000295767 SPEF2Q9C093 1822 aa34.69■■■■□ 3.14
CHCHD4-201ENST00000295767 CCDC152Q4G0S7 254 aa34.68■■■■□ 3.14
CHCHD4-201ENST00000295767 GREM2Q9H772 168 aa34.68■■■■□ 3.14
CHCHD4-201ENST00000295767 FAM161AQ3B820 660 aa34.67■■■■□ 3.14
CHCHD4-201ENST00000295767 CEP85Q6P2H3 762 aa34.67■■■■□ 3.14
CHCHD4-201ENST00000295767 COL4A1P02462 1669 aa34.67■■■■□ 3.14
CHCHD4-201ENST00000295767 MTX1Q13505 466 aa34.66■■■■□ 3.14
CHCHD4-201ENST00000295767 CD2APQ9Y5K6 639 aa34.66■■■■□ 3.14
CHCHD4-201ENST00000295767 C2CD5Q86YS7 1000 aa34.66■■■■□ 3.14
CHCHD4-201ENST00000295767 RTL9Q8NET4 1388 aa34.65■■■■□ 3.14
CHCHD4-201ENST00000295767 SRGNP10124 158 aa34.65■■■■□ 3.14
CHCHD4-201ENST00000295767 CHRNA5P30532 468 aa34.65■■■■□ 3.14
CHCHD4-201ENST00000295767 RPGRQ92834 1020 aaKnown RBP34.65■■■■□ 3.14
CHCHD4-201ENST00000295767 PCDHB15Q9Y5E8 787 aa34.65■■■■□ 3.14
CHCHD4-201ENST00000295767 BRCA1P38398 1863 aaKnown RBP34.64■■■■□ 3.14
CHCHD4-201ENST00000295767 PNMA6EA0A0J9YXQ4 647 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 H0YIN7 160 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 ATP8B2P98198 1209 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 ITGA6P23229 1130 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 RPAP2Q8IXW5 612 aaPredicted RBP34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 SEC31BQ9NQW1 1179 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 PDZRN3Q9UPQ7 1066 aa34.63■■■■□ 3.13
CHCHD4-201ENST00000295767 SRGAP3O43295 1099 aa34.62■■■■□ 3.13
CHCHD4-201ENST00000295767 TGFB2P61812 414 aa34.61■■■■□ 3.13
CHCHD4-201ENST00000295767 SIRT2Q8IXJ6 389 aa34.61■■■■□ 3.13
CHCHD4-201ENST00000295767 FHDC1Q9C0D6 1143 aaPredicted RBP34.61■■■■□ 3.13
CHCHD4-201ENST00000295767 NPR1P16066 1061 aa34.6■■■■□ 3.13
CHCHD4-201ENST00000295767 HOXA10P31260 410 aaPredicted RBP34.6■■■■□ 3.13
CHCHD4-201ENST00000295767 IFIT5Q13325 482 aaKnown RBP34.6■■■■□ 3.13
CHCHD4-201ENST00000295767 DDX46Q7L014 1031 aaKnown RBP34.6■■■■□ 3.13
CHCHD4-201ENST00000295767 MASTLQ96GX5 879 aa34.6■■■■□ 3.13
CHCHD4-201ENST00000295767 A0A0G2JLW4 131 aa34.59■■■■□ 3.13
CHCHD4-201ENST00000295767 DPEP1P16444 411 aa34.59■■■■□ 3.13
CHCHD4-201ENST00000295767 CCDC57Q2TAC2 916 aa34.59■■■■□ 3.13
CHCHD4-201ENST00000295767 RFX5P48382 616 aaPredicted RBP34.59■■■■□ 3.13
CHCHD4-201ENST00000295767 RBM17Q96I25 401 aaKnown RBP34.59■■■■□ 3.13
CHCHD4-201ENST00000295767 ANKRD18BA2A2Z9 1011 aa34.58■■■■□ 3.13
CHCHD4-201ENST00000295767 POLA2Q14181 598 aa34.57■■■■□ 3.12
CHCHD4-201ENST00000295767 SSH3Q8TE77 659 aa34.57■■■■□ 3.12
CHCHD4-201ENST00000295767 ZNF622Q969S3 477 aaKnown RBP eCLIP34.57■■■■□ 3.12
CHCHD4-201ENST00000295767 CRAMP1Q96RY5 1269 aa34.57■■■■□ 3.12
CHCHD4-201ENST00000295767 KCNA3P22001 575 aa34.56■■■■□ 3.12
CHCHD4-201ENST00000295767 STYK1Q6J9G0 422 aa34.56■■■■□ 3.12
CHCHD4-201ENST00000295767 NLGN2Q8NFZ4 835 aa34.56■■■■□ 3.12
CHCHD4-201ENST00000295767 CELF1Q92879 486 aaKnown RBP34.56■■■■□ 3.12
CHCHD4-201ENST00000295767 SLX4Q8IY92 1834 aa34.56■■■■□ 3.12
CHCHD4-201ENST00000295767 KLHDC4Q8TBB5 520 aa34.55■■■■□ 3.12
CHCHD4-201ENST00000295767 ZNF594Q96JF6 807 aaPredicted RBP34.55■■■■□ 3.12
CHCHD4-201ENST00000295767 CDC5LQ99459 802 aaKnown RBP34.55■■■■□ 3.12
CHCHD4-201ENST00000295767 GRAPQ13588 217 aa34.54■■■■□ 3.12
CHCHD4-201ENST00000295767 GRAPLQ8TC17 118 aaPredicted RBP34.54■■■■□ 3.12
CHCHD4-201ENST00000295767 PTPN12Q05209 780 aaKnown RBP34.53■■■■□ 3.12
CHCHD4-201ENST00000295767 HMMRO75330 724 aa34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 TAF7LQ5H9L4 462 aa34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 PA2G4Q9UQ80 394 aaKnown RBP34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 ALDH1B1P30837 517 aa34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 ANKRD18AQ8IVF6 992 aa34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 SYT17Q9BSW7 474 aa34.52■■■■□ 3.12
CHCHD4-201ENST00000295767 RPS8P62241 208 aaKnown RBP34.5■■■■□ 3.11
CHCHD4-201ENST00000295767 CNKSR1Q969H4 720 aa34.5■■■■□ 3.11
CHCHD4-201ENST00000295767 COPRSQ9NQ92 184 aa34.5■■■■□ 3.11
CHCHD4-201ENST00000295767 A0A1B0GUL6 1792 aa34.5■■■■□ 3.11
CHCHD4-201ENST00000295767 ERICH6BQ5W0A0 696 aa34.49■■■■□ 3.11
CHCHD4-201ENST00000295767 LRRC37AA6NMS7 1700 aa34.49■■■■□ 3.11
CHCHD4-201ENST00000295767 SRCAPQ6ZRS2 3230 aa34.49■■■■□ 3.11
CHCHD4-201ENST00000295767 IGHMBP2P38935 993 aaKnown RBP34.48■■■■□ 3.11
CHCHD4-201ENST00000295767 SIL1Q9H173 461 aa34.48■■■■□ 3.11
CHCHD4-201ENST00000295767 PRPF40BQ6NWY9 871 aaKnown RBP34.47■■■■□ 3.11
CHCHD4-201ENST00000295767 PIM2Q9P1W9 311 aa34.47■■■■□ 3.11
CHCHD4-201ENST00000295767 HDAC1Q13547 482 aaPredicted RBP34.46■■■■□ 3.11
CHCHD4-201ENST00000295767 LDHAL6AQ6ZMR3 332 aa34.46■■■■□ 3.11
CHCHD4-201ENST00000295767 TTLL6Q8N841 843 aa34.46■■■■□ 3.11
CHCHD4-201ENST00000295767 MPHOSPH8Q99549 860 aa34.46■■■■□ 3.11
CHCHD4-201ENST00000295767 PUS3Q9BZE2 481 aaKnown RBP34.46■■■■□ 3.11
CHCHD4-201ENST00000295767 PPEF1O14829 653 aaPredicted RBP34.45■■■■□ 3.11
CHCHD4-201ENST00000295767 BBOX1O75936 387 aa34.45■■■■□ 3.11
CHCHD4-201ENST00000295767 WWC3Q9ULE0 1092 aa34.45■■■■□ 3.11
CHCHD4-201ENST00000295767 SLC51AQ86UW1 340 aa34.44■■■■□ 3.1
CHCHD4-201ENST00000295767 BSDC1Q9NW68 430 aaPredicted RBP34.44■■■■□ 3.1
CHCHD4-201ENST00000295767 LRRC24Q50LG9 513 aa34.44■■■■□ 3.1
CHCHD4-201ENST00000295767 ARFGEF1Q9Y6D6 1849 aa34.44■■■■□ 3.1
CHCHD4-201ENST00000295767 SURF6O75683 361 aaKnown RBP34.43■■■■□ 3.1
CHCHD4-201ENST00000295767 IGHDP01880 384 aa34.43■■■■□ 3.1
CHCHD4-201ENST00000295767 CNNM1Q9NRU3 951 aa34.43■■■■□ 3.1
CHCHD4-201ENST00000295767 EYA2O00167 538 aa34.42■■■■□ 3.1
CHCHD4-201ENST00000295767 EXOC6BQ9Y2D4 811 aa34.42■■■■□ 3.1
CHCHD4-201ENST00000295767 NOP58Q9Y2X3 529 aaKnown RBP34.42■■■■□ 3.1
CHCHD4-201ENST00000295767 RWDD1Q9H446 243 aaPredicted RBP34.41■■■■□ 3.1
CHCHD4-201ENST00000295767 ATG9AQ7Z3C6 839 aa34.41■■■■□ 3.1
CHCHD4-201ENST00000295767 TMC4Q7Z404 712 aa34.41■■■■□ 3.1
CHCHD4-201ENST00000295767 FBXO3Q9UK99 471 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms