RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 KLRG2A4D1S0 409 aaPredicted RBP28.77■■■□□ 2.2
C1orf35-201ENST00000272139 C2CD5Q86YS7 1000 aa28.77■■■□□ 2.2
C1orf35-201ENST00000272139 MEIS3Q99687 375 aa28.77■■■□□ 2.2
C1orf35-201ENST00000272139 TNRC6CQ9HCJ0 1690 aaKnown RBP28.76■■■□□ 2.19
C1orf35-201ENST00000272139 PLA2G12BQ9BX93 195 aa28.76■■■□□ 2.19
C1orf35-201ENST00000272139 ARFGEF1Q9Y6D6 1849 aa28.75■■■□□ 2.19
C1orf35-201ENST00000272139 DDX19BQ9UMR2 479 aa28.75■■■□□ 2.19
C1orf35-201ENST00000272139 C3orf67Q6ZVT6 689 aa28.74■■■□□ 2.19
C1orf35-201ENST00000272139 ZBTB7BO15156 539 aaPredicted RBP28.73■■■□□ 2.19
C1orf35-201ENST00000272139 SF3B3Q15393 1217 aaKnown RBP28.73■■■□□ 2.19
C1orf35-201ENST00000272139 RPGRQ92834 1020 aaKnown RBP28.73■■■□□ 2.19
C1orf35-201ENST00000272139 SUCLG2Q96I99 432 aa28.73■■■□□ 2.19
C1orf35-201ENST00000272139 DLEC1Q9Y238 1755 aa28.73■■■□□ 2.19
C1orf35-201ENST00000272139 SRGNP10124 158 aa28.72■■■□□ 2.19
C1orf35-201ENST00000272139 CRY2Q49AN0 593 aa28.72■■■□□ 2.19
C1orf35-201ENST00000272139 ARHGAP27Q6ZUM4 889 aa28.72■■■□□ 2.19
C1orf35-201ENST00000272139 CHMP4BQ9H444 224 aaKnown RBP28.72■■■□□ 2.19
C1orf35-201ENST00000272139 NPR1P16066 1061 aa28.71■■■□□ 2.19
C1orf35-201ENST00000272139 CTSWP56202 376 aa28.71■■■□□ 2.19
C1orf35-201ENST00000272139 ZNF622Q969S3 477 aaKnown RBP eCLIP28.71■■■□□ 2.198e-7■■■□□ 14.7
C1orf35-201ENST00000272139 MASTLQ96GX5 879 aa28.71■■■□□ 2.19
C1orf35-201ENST00000272139 FOXO4P98177 505 aa28.7■■■□□ 2.19
C1orf35-201ENST00000272139 CCDC152Q4G0S7 254 aa28.7■■■□□ 2.19
C1orf35-201ENST00000272139 TTLL11Q8NHH1 800 aa28.7■■■□□ 2.19
C1orf35-201ENST00000272139 COL11A2P13942 1736 aaPredicted RBP28.7■■■□□ 2.19
C1orf35-201ENST00000272139 RBM17Q96I25 401 aaKnown RBP28.69■■■□□ 2.18
C1orf35-201ENST00000272139 KAZALD1Q96I82 304 aa28.69■■■□□ 2.18
C1orf35-201ENST00000272139 GNAI2P04899 355 aa28.69■■■□□ 2.18
C1orf35-201ENST00000272139 EPHA10Q5JZY3 1008 aa28.69■■■□□ 2.18
C1orf35-201ENST00000272139 STYK1Q6J9G0 422 aa28.69■■■□□ 2.18
C1orf35-201ENST00000272139 DDX46Q7L014 1031 aaKnown RBP28.69■■■□□ 2.18
C1orf35-201ENST00000272139 CCDC85AQ96PX6 553 aaPredicted RBP28.69■■■□□ 2.18
C1orf35-201ENST00000272139 LRRFIP2Q9Y608 721 aaKnown RBP28.69■■■□□ 2.18
C1orf35-201ENST00000272139 CSF1RP07333 972 aa28.68■■■□□ 2.18
C1orf35-201ENST00000272139 LMBR1LQ6UX01 489 aa28.68■■■□□ 2.18
C1orf35-201ENST00000272139 TTLL6Q8N841 843 aa28.68■■■□□ 2.18
C1orf35-201ENST00000272139 BICC1Q9H694 974 aaKnown RBP28.68■■■□□ 2.18
C1orf35-201ENST00000272139 CACNA1SQ13698 1873 aa28.67■■■□□ 2.18
C1orf35-201ENST00000272139 ALDH1B1P30837 517 aa28.67■■■□□ 2.18
C1orf35-201ENST00000272139 HOXA10P31260 410 aaPredicted RBP28.67■■■□□ 2.18
C1orf35-201ENST00000272139 CHMP3Q9Y3E7 222 aa28.67■■■□□ 2.18
C1orf35-201ENST00000272139 TAF1P21675 1872 aa28.66■■■□□ 2.18
C1orf35-201ENST00000272139 CNKSR1Q969H4 720 aa28.65■■■□□ 2.18
C1orf35-201ENST00000272139 CRAMP1Q96RY5 1269 aa28.65■■■□□ 2.18
C1orf35-201ENST00000272139 CRBNQ96SW2 442 aa28.64■■■□□ 2.18
C1orf35-201ENST00000272139 GREM2Q9H772 168 aa28.64■■■□□ 2.18
C1orf35-201ENST00000272139 RABL6Q3YEC7 729 aaPredicted RBP28.63■■■□□ 2.17
C1orf35-201ENST00000272139 ZBTB40Q9NUA8 1239 aa28.63■■■□□ 2.17
C1orf35-201ENST00000272139 ANKRD44Q8N8A2 993 aa28.62■■■□□ 2.17
C1orf35-201ENST00000272139 RTL9Q8NET4 1388 aa28.62■■■□□ 2.17
C1orf35-201ENST00000272139 FAM161AQ3B820 660 aa28.61■■■□□ 2.17
C1orf35-201ENST00000272139 C1orf115Q9H7X2 142 aa28.61■■■□□ 2.17
C1orf35-201ENST00000272139 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
C1orf35-201ENST00000272139 ITGA6P23229 1130 aa28.6■■■□□ 2.17
C1orf35-201ENST00000272139 IFIT5Q13325 482 aaKnown RBP28.6■■■□□ 2.17
C1orf35-201ENST00000272139 CCDC57Q2TAC2 916 aa28.6■■■□□ 2.17
C1orf35-201ENST00000272139 SLX4Q8IY92 1834 aa28.6■■■□□ 2.17
C1orf35-201ENST00000272139 ANKRD18BA2A2Z9 1011 aa28.6■■■□□ 2.17
C1orf35-201ENST00000272139 GRAPQ13588 217 aa28.6■■■□□ 2.17
C1orf35-201ENST00000272139 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
C1orf35-201ENST00000272139 CDC5LQ99459 802 aaKnown RBP28.6■■■□□ 2.17
C1orf35-201ENST00000272139 GPBP1L1Q9HC44 474 aaPredicted RBP28.6■■■□□ 2.17
C1orf35-201ENST00000272139 BBOX1O75936 387 aa28.59■■■□□ 2.17
C1orf35-201ENST00000272139 RPS8P62241 208 aaKnown RBP28.58■■■□□ 2.17
C1orf35-201ENST00000272139 IRX6P78412 446 aaPredicted RBP28.58■■■□□ 2.17
C1orf35-201ENST00000272139 PRPF40BQ6NWY9 871 aaKnown RBP28.58■■■□□ 2.17
C1orf35-201ENST00000272139 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
C1orf35-201ENST00000272139 ANKRD18AQ8IVF6 992 aa28.57■■■□□ 2.16
C1orf35-201ENST00000272139 TAF7LQ5H9L4 462 aa28.56■■■□□ 2.16
C1orf35-201ENST00000272139 C9orf131Q5VYM1 1079 aa28.56■■■□□ 2.16
C1orf35-201ENST00000272139 MTX1Q13505 466 aa28.55■■■□□ 2.16
C1orf35-201ENST00000272139 SPEF2Q9C093 1822 aa28.55■■■□□ 2.16
C1orf35-201ENST00000272139 SRGAP3O43295 1099 aa28.54■■■□□ 2.16
C1orf35-201ENST00000272139 IGHMBP2P38935 993 aaKnown RBP28.54■■■□□ 2.16
C1orf35-201ENST00000272139 PPEF1O14829 653 aaPredicted RBP28.53■■■□□ 2.16
C1orf35-201ENST00000272139 ATP8B2P98198 1209 aa28.53■■■□□ 2.16
C1orf35-201ENST00000272139 TMC4Q7Z404 712 aa28.53■■■□□ 2.16
C1orf35-201ENST00000272139 EXOC6Q8TAG9 804 aa28.53■■■□□ 2.16
C1orf35-201ENST00000272139 ZNF526Q8TF50 670 aaPredicted RBP28.53■■■□□ 2.16
C1orf35-201ENST00000272139 MPHOSPH8Q99549 860 aa28.53■■■□□ 2.16
C1orf35-201ENST00000272139 TMX4Q9H1E5 349 aaPredicted RBP28.53■■■□□ 2.16
C1orf35-201ENST00000272139 RNF181Q9P0P0 153 aa28.53■■■□□ 2.16
C1orf35-201ENST00000272139 ZNF219Q9P2Y4 722 aaPredicted RBP28.53■■■□□ 2.16
C1orf35-201ENST00000272139 AAMPQ13685 434 aa28.52■■■□□ 2.16
C1orf35-201ENST00000272139 SOGA3Q5TF21 947 aa28.52■■■□□ 2.16
C1orf35-201ENST00000272139 RPAP2Q8IXW5 612 aaPredicted RBP28.52■■■□□ 2.16
C1orf35-201ENST00000272139 ZNF594Q96JF6 807 aaPredicted RBP28.52■■■□□ 2.16
C1orf35-201ENST00000272139 C21orf2O43822 256 aa28.51■■■□□ 2.15
C1orf35-201ENST00000272139 CEP85Q6P2H3 762 aa28.51■■■□□ 2.15
C1orf35-201ENST00000272139 BSDC1Q9NW68 430 aaPredicted RBP28.51■■■□□ 2.15
C1orf35-201ENST00000272139 COL4A1P02462 1669 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 PNMA6EA0A0J9YXQ4 647 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 LMNB1P20700 586 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 C1QTNF8P60827 252 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 LDHAL6AQ6ZMR3 332 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 SP8Q8IXZ3 490 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 ATP6V0A2Q9Y487 856 aa28.5■■■□□ 2.15
C1orf35-201ENST00000272139 ZC3H4Q9UPT8 1303 aaKnown RBP28.49■■■□□ 2.15
C1orf35-201ENST00000272139 RFX5P48382 616 aaPredicted RBP28.49■■■□□ 2.15
C1orf35-201ENST00000272139 RASSF7Q02833 373 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms