RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 GDPD2Q9HCC8 539 aa15.05■□□□□ 0
NEK9-201ENST00000238616 SCAPERQ9BY12 1400 aa15.05■□□□□ 0
NEK9-201ENST00000238616 GMNNO75496 209 aa15.05■□□□□ 0
NEK9-201ENST00000238616 GTF2F1P35269 517 aaKnown RBP eCLIP15.05■□□□□ 0
NEK9-201ENST00000238616 CCDC114Q96M63 670 aa15.05■□□□□ 0
NEK9-201ENST00000238616 ZNF408Q9H9D4 720 aa15.05■□□□□ 0
NEK9-201ENST00000238616 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ -0
NEK9-201ENST00000238616 CFAP157Q5JU67 520 aa15.05■□□□□ -0
NEK9-201ENST00000238616 CEP83Q9Y592 693 aa15.05■□□□□ -0
NEK9-201ENST00000238616 LDHAL6AQ6ZMR3 332 aa15.05■□□□□ -0
NEK9-201ENST00000238616 ANKRD50Q9ULJ7 1429 aa15.04■□□□□ -0
NEK9-201ENST00000238616 CWC25Q9NXE8 425 aaPredicted RBP15.04■□□□□ -0
NEK9-201ENST00000238616 GOLGA4Q13439 2230 aaKnown RBP15.04■□□□□ -0
NEK9-201ENST00000238616 UAP1Q16222 522 aaPredicted RBP15.04■□□□□ -0
NEK9-201ENST00000238616 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.04■□□□□ -0
NEK9-201ENST00000238616 SMARCA4P51532 1647 aa15.04■□□□□ -0
NEK9-201ENST00000238616 PPP1R9BQ96SB3 815 aa15.04■□□□□ -0
NEK9-201ENST00000238616 PDE3AQ14432 1141 aa15.04■□□□□ -0
NEK9-201ENST00000238616 KCNH5Q8NCM2 988 aa15.04■□□□□ -0
NEK9-201ENST00000238616 FAM13AO94988 1023 aa15.04■□□□□ -0
NEK9-201ENST00000238616 CCDC14Q49A88 953 aa15.04■□□□□ -0
NEK9-201ENST00000238616 ERMNQ8TAM6 284 aa15.04■□□□□ -0
NEK9-201ENST00000238616 ZNF526Q8TF50 670 aaPredicted RBP15.04■□□□□ -0
NEK9-201ENST00000238616 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
NEK9-201ENST00000238616 NACA2Q9H009 215 aa15.04■□□□□ -0
NEK9-201ENST00000238616 RASAL2Q9UJF2 1139 aa15.04■□□□□ -0
NEK9-201ENST00000238616 NAIPQ13075 1403 aa15.03■□□□□ -0
NEK9-201ENST00000238616 CUL4BQ13620 913 aa15.03■□□□□ -0
NEK9-201ENST00000238616 SPOUT1Q5T280 376 aaKnown RBP15.03■□□□□ -0
NEK9-201ENST00000238616 SETDB2Q96T68 719 aa15.03■□□□□ -0
NEK9-201ENST00000238616 HYPKQ9NX55 129 aa15.03■□□□□ -0
NEK9-201ENST00000238616 ANKS4BQ8N8V4 417 aa15.03■□□□□ -0
NEK9-201ENST00000238616 PPP2R5DQ14738 602 aa15.03■□□□□ -0
NEK9-201ENST00000238616 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
NEK9-201ENST00000238616 STX1AQ16623 288 aa15.03■□□□□ -0
NEK9-201ENST00000238616 RNF34Q969K3 372 aa15.03■□□□□ -0
NEK9-201ENST00000238616 MKRN1Q9UHC7 482 aaKnown RBP15.03■□□□□ -0
NEK9-201ENST00000238616 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
NEK9-201ENST00000238616 USP37Q86T82 979 aa15.02■□□□□ -0
NEK9-201ENST00000238616 SELENOSQ9BQE4 189 aa15.02■□□□□ -0
NEK9-201ENST00000238616 FOXO3O43524 673 aa15.02■□□□□ -0
NEK9-201ENST00000238616 ERCC5P28715 1186 aaPredicted RBP15.02■□□□□ -0
NEK9-201ENST00000238616 IARSP41252 1262 aaKnown RBP15.02■□□□□ -0
NEK9-201ENST00000238616 WAPLQ7Z5K2 1190 aa15.02■□□□□ -0
NEK9-201ENST00000238616 HDAC9Q9UKV0 1011 aa15.02■□□□□ -0
NEK9-201ENST00000238616 AGTPBP1Q9UPW5 1226 aa15.02■□□□□ -0
NEK9-201ENST00000238616 KIF2AO00139 706 aaPredicted RBP15.02■□□□□ -0
NEK9-201ENST00000238616 NBPF1Q3BBV0 1214 aa15.02■□□□□ -0
NEK9-201ENST00000238616 SEPT14Q6ZU15 432 aa15.02■□□□□ -0
NEK9-201ENST00000238616 PPP1R42Q7Z4L9 355 aa15.02■□□□□ -0
NEK9-201ENST00000238616 EPRSP07814 1512 aaKnown RBP15.02□□□□□ -0.01
NEK9-201ENST00000238616 NOL3O60936 208 aaKnown RBP15.02□□□□□ -0.01
NEK9-201ENST00000238616 SNW1Q13573 536 aaKnown RBP15.02□□□□□ -0.01
NEK9-201ENST00000238616 SCAND2PQ9GZW5 306 aaPredicted RBP15.02□□□□□ -0.01
NEK9-201ENST00000238616 KRT5P13647 590 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 TSHZ3Q63HK5 1081 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 SMC6Q96SB8 1091 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 CLSTN2Q9H4D0 955 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 NOD1Q9Y239 953 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 GINS2Q9Y248 185 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 USP16Q9Y5T5 823 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 TSPOAP1O95153 1857 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 GJB2P29033 226 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 NAA25Q14CX7 972 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 JAG2Q9Y219 1238 aa15.02□□□□□ -0.01
NEK9-201ENST00000238616 KIF5AQ12840 1032 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 HARSP12081 509 aaKnown RBP15.01□□□□□ -0.01
NEK9-201ENST00000238616 KRT9P35527 623 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 RPUSD2Q8IZ73 545 aaKnown RBP15.01□□□□□ -0.01
NEK9-201ENST00000238616 TBC1D31Q96DN5 1066 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 GJA3Q9Y6H8 435 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 NSD3Q9BZ95 1437 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 FLIIQ13045 1269 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 DDX12PQ92771 950 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 C8orf37Q96NL8 207 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 SPAG5Q96R06 1193 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 N4BP3O15049 544 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 CTAGE5O15320 804 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 ERCC3P19447 782 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 LMOD1P29536 600 aaPredicted RBP15.01□□□□□ -0.01
NEK9-201ENST00000238616 MNAT1P51948 309 aa15.01□□□□□ -0.01
NEK9-201ENST00000238616 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
NEK9-201ENST00000238616 GTPBP4Q9BZE4 634 aaKnown RBP15.01□□□□□ -0.01
NEK9-201ENST00000238616 GSTO1P78417 241 aa15□□□□□ -0.01
NEK9-201ENST00000238616 WDR63Q8IWG1 891 aa15□□□□□ -0.01
NEK9-201ENST00000238616 PKD2L1Q9P0L9 805 aa15□□□□□ -0.01
NEK9-201ENST00000238616 NOL12Q9UGY1 213 aaKnown RBP eCLIP15□□□□□ -0.01
NEK9-201ENST00000238616 V9GYY5 206 aaPredicted RBP15□□□□□ -0.01
NEK9-201ENST00000238616 HSPA4P34932 840 aa15□□□□□ -0.01
NEK9-201ENST00000238616 ATP6V1AP38606 617 aa15□□□□□ -0.01
NEK9-201ENST00000238616 SMARCC2Q8TAQ2 1214 aa15□□□□□ -0.01
NEK9-201ENST00000238616 TTLL3Q9Y4R7 772 aa15□□□□□ -0.01
NEK9-201ENST00000238616 MSL1Q68DK7 614 aa15□□□□□ -0.01
NEK9-201ENST00000238616 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
NEK9-201ENST00000238616 TRIM7Q9C029 511 aa15□□□□□ -0.01
NEK9-201ENST00000238616 E7EVH7 732 aa15□□□□□ -0.01
NEK9-201ENST00000238616 RAPGEF3O95398 923 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms