RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 SYT10Q6XYQ8 523 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SIGLEC15Q6ZMC9 328 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 C19orf35Q6ZS72 473 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 C12orf56Q8IXR9 622 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 NPBQ8NG41 125 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 LILRB4Q8NHJ6 448 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 RDH5Q92781 318 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 LHX4Q969G2 390 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 RAB3CQ96E17 227 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 COG3Q96JB2 828 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MTMR9Q96QG7 549 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 NUDT16L1Q9BRJ7 211 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 NDFIP1Q9BT67 221 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ANKRD2Q9GZV1 360 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PORCNQ9H237 461 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 NANSQ9NR45 359 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 STMN3Q9NZ72 180 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SEPT10Q9P0V9 454 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ERVK-18Q9QC07 812 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CABIN1Q9Y6J0 2220 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SIP14410 1827 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 FBN2P35556 2912 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MGAMO43451 1857 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CDK5RAP2Q96SN8 1893 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ABCB11O95342 1321 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 EP400Q96L91 3159 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MED13LQ71F56 2210 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 WNK1Q9H4A3 2382 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 DOCK2Q92608 1830 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SONP18583 2426 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 CFAP46Q8IYW2 2715 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ESYT2A0FGR8 921 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 TUBAL3A6NHL2 446 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ZNF233A6NK53 670 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ZNF254O75437 659 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 APC2O95996 2303 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PRB1P04280 392 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 IGFBP1P08833 259 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 IQCF3P0C7M6 154 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 GNSP15586 552 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CCNA2P20248 432 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CYP2B6P20813 491 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CTNNB1P35222 781 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 KIR3DL2P43630 455 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 GPC3P51654 580 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 KCNK10P57789 538 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 EIF3IQ13347 325 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 USH1GQ495M9 461 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 NANOGP8Q6NSW7 305 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 RPUSD3Q6P087 351 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 PAQR7Q86WK9 346 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CERS3Q8IU89 383 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PCP2Q8IVA1 136 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 LIX1Q8N485 282 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 TEX29Q8N6K0 151 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 DEFB124Q8NES8 71 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 OR10G2Q8NGC3 310 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 AENQ8WTP8 325 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 DEPDC1BQ8WUY9 529 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MRPS27Q92552 414 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 HAS2Q92819 552 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 TMEM159Q96B96 161 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 LRRC58Q96CX6 371 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CFAP36Q96G28 342 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 C12orf42Q96LP6 360 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 TEX15Q9BXT5 2789 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 FTHL17Q9BXU8 183 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 OR10A4Q9H209 315 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MCCC2Q9HCC0 563 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 DMAP1Q9NPF5 467 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 MEPEQ9NQ76 525 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 HOXC10Q9NYD6 342 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 HMG20BQ9P0W2 317 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ASB3Q9Y575 518 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 NFASCO94856 1347 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 KMT2AQ03164 3969 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 MN1Q10571 1320 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 NRCAMQ92823 1304 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PSME4Q14997 1843 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.4□□□□□ -2.353e-15■■■■■ 56.9
CEP290-208ENST00000604024 KTN1Q86UP2 1357 aaKnown RBP0.39□□□□□ -2.35
CEP290-208ENST00000604024 IGLV11-55A0A075B6I3 123 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 RNF113AO15541 343 aaKnown RBP0.39□□□□□ -2.35
CEP290-208ENST00000604024 SDC3O75056 442 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 SCRG1O75711 98 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 CTDNEP1O95476 244 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 PNPP00491 289 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 CCDC192P0DO97 292 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 H2AFXP16104 143 aaPredicted RBP0.39□□□□□ -2.35
CEP290-208ENST00000604024 MUTP22033 750 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 ADORA2BP29275 332 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 PTGDSP41222 190 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 ACADSBP45954 432 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 PPP5CP53041 499 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 GEMP55040 296 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 VLDLRP98155 873 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 MEF2CQ06413 473 aaPredicted RBP0.39□□□□□ -2.35
CEP290-208ENST00000604024 CCDC57Q2TAC2 916 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 VAX1Q5SQQ9 334 aa0.39□□□□□ -2.35
CEP290-208ENST00000604024 DNLZQ5SXM8 178 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms