RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GPR45Q9Y5Y3 372 aa15.17■□□□□ 0.02
RETREG3-210ENST00000590541 DYSFO75923 2080 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 CCT8L1PA6NM43 557 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 DNAJA2O60884 412 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 CSTAP01040 98 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 IL6P05231 212 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 ALDOCP09972 364 aaKnown RBP15.16■□□□□ 0.02
RETREG3-210ENST00000590541 ZNF23P17027 643 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 EGR1P18146 543 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 GABRA6Q16445 453 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 NDUFAF6Q330K2 333 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 UBE2J2Q8N2K1 259 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 MGARPQ8TDB4 240 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 TMEM234Q8WY98 164 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 PMM1Q92871 262 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 MAELQ96JY0 434 aaKnown RBP15.16■□□□□ 0.02
RETREG3-210ENST00000590541 MUS81Q96NY9 551 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 OR52E6Q96RD3 313 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 PANX1Q96RD7 426 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 MKLN1Q9UL63 735 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 WDR45Q9Y484 360 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 FKBP7Q9Y680 259 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 ARFGEF3Q5TH69 2177 aa15.16■□□□□ 0.02
RETREG3-210ENST00000590541 TENM1Q9UKZ4 2725 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 IGKV3D-15A0A087WSY6 115 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 LOC390937A0A1W2PQ73 354 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 CCDC154A6NI56 674 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 FCMRO60667 390 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 UGT2B17O75795 530 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 OR12D1P0DN82 309 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 PGCP20142 388 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 EPHA3P29320 983 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 NTF4P34130 210 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 UFM1P61960 85 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 HPCAP84074 193 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 SKP2Q13309 424 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 GSTA3Q16772 222 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 IQCCQ4KMZ1 466 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 AGBL2Q5U5Z8 902 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 CLEC4FQ8N1N0 589 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 TMCO5AQ8N6Q1 288 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 WDR31Q8NA23 367 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 ROPN1LQ96C74 230 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 FBXO17Q96EF6 278 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 TEX37Q96LM6 180 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 OR5B2Q96R09 309 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 BPESC1Q9GZL8 116 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 WDR55Q9H6Y2 383 aaPredicted RBP15.15■□□□□ 0.02
RETREG3-210ENST00000590541 FKRPQ9H9S5 495 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 SERINC1Q9NRX5 453 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 TAS2R16Q9NYV7 291 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 PRDM4Q9UKN5 801 aa15.15■□□□□ 0.02
RETREG3-210ENST00000590541 ITGA5P08648 1049 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 KITP10721 976 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 FKBP2P26885 142 aaKnown RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 QPRTQ15274 297 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 CARTPTQ16568 116 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 PDCD4Q53EL6 469 aaKnown RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 ABLIM2Q6H8Q1 611 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 C3orf33Q6P1S2 294 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 MSANTD1Q6ZTZ1 278 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 CMIPQ8IY22 773 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 RFWD2Q8NHY2 731 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 APH1AQ96BI3 265 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 ZBTB9Q96C00 473 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 TRNT1Q96Q11 434 aaKnown RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 ASB6Q9NWX5 421 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 ZIM2Q9NZV7 527 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 MALT1Q9UDY8 824 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 KCNE5Q9UJ90 142 aa15.14■□□□□ 0.01
RETREG3-210ENST00000590541 NOSIPQ9Y314 301 aaKnown RBP15.14■□□□□ 0.01
RETREG3-210ENST00000590541 LRP5LA4QPB2 252 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 ZNF716A6NP11 495 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 ATP6V1G2-DDX39BF2Z307 99 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 SLC22A3O75751 556 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 VENTXO95231 258 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 KRT75O95678 551 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 IL12AP29459 219 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 SRP14P37108 136 aaKnown RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 DIO1P49895 249 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 CCR4P51679 360 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 SLC25A3Q00325 362 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 PDK3Q15120 406 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 NXNQ6DKJ4 435 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 OR7E24Q6IFN5 339 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 TYW3Q6IPR3 259 aaKnown RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 ZNF621Q6ZSS3 439 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 TMPPEQ6ZT21 453 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 ANKS4BQ8N8V4 417 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 FAM71CQ8NEG0 241 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 SLC25A43Q8WUT9 341 aaPredicted RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 THUMPD3Q9BV44 507 aaKnown RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 QRSL1Q9H0R6 528 aaKnown RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 MYOZ1Q9NP98 299 aaPredicted RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 EXOSC3Q9NQT5 275 aaKnown RBP15.13■□□□□ 0.01
RETREG3-210ENST00000590541 ACER3Q9NUN7 267 aa15.13■□□□□ 0.01
RETREG3-210ENST00000590541 EMC3Q9P0I2 261 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms