RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GOLGA8OA6NCC3 632 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 CCDC154A6NI56 674 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 GOLGA8NF8WBI6 632 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 KLF11O14901 512 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 EIF1BO60739 113 aaKnown RBP12.01□□□□□ -0.49
HDAC5-208ENST00000588419 AKR7A3O95154 331 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 GKN3PP0CG01 181 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 SLC25A16P16260 332 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 CLK1P49759 484 aaKnown RBP12.01□□□□□ -0.49
HDAC5-208ENST00000588419 ANXA11P50995 505 aaKnown RBP12.01□□□□□ -0.49
HDAC5-208ENST00000588419 DSCR9P59020 149 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 UFM1P61960 85 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 CHRNB3Q05901 458 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 CEACAM7Q14002 265 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 GNA13Q14344 377 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 GGTLC2Q14390 218 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 HIKESHIQ53FT3 197 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 COX20Q5RI15 118 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF544Q6NX49 715 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 AAED1Q7RTV5 226 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 WDR31Q8NA23 367 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
HDAC5-208ENST00000588419 OIT3Q8WWZ8 545 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 TEX37Q96LM6 180 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 MUS81Q96NY9 551 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 SORT1Q99523 831 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 KCNS3Q9BQ31 491 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 SLC38A1Q9H2H9 487 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 CHODLQ9H9P2 273 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 KCNK9Q9NPC2 374 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 PNPOQ9NVS9 261 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 PARPBPQ9NWS1 579 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 ADPRHL2Q9NX46 363 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 DCTN4Q9UJW0 460 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
HDAC5-208ENST00000588419 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
HDAC5-208ENST00000588419 A0A096LNT2 108 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 CFAP73A6NFT4 308 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 AGAP5A6NIR3 686 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 H7C417 338 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 PHF1O43189 567 aaPredicted RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 WNT11O96014 354 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 BMP4P12644 408 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 CXCR1P25024 350 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 FKBP2P26885 142 aaKnown RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 PRPS1P60891 318 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 TGFBR3Q03167 851 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 EPS8Q12929 822 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 BNIP2Q12982 314 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 STX3Q13277 289 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 VHLLQ6RSH7 139 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 VRK2Q86Y07 508 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 CMIPQ8IY22 773 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 C17orf78Q8N4C9 275 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM99Q8N816 258 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 ANKRD42Q8N9B4 389 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 TMEM158Q8WZ71 300 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 PMM1Q92871 262 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 CCDC115Q96NT0 180 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF385AQ96PM9 386 aaKnown RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 TRNT1Q96Q11 434 aaKnown RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
HDAC5-208ENST00000588419 OR52E6Q96RD3 313 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 ZBTB18Q99592 522 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 TAPBPLQ9BX59 468 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 BEX2Q9BXY8 128 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 RLIMQ9NVW2 624 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 BTNL2Q9UIR0 455 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 CDC42EP3Q9UKI2 254 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 TRAPPC4Q9Y296 219 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 FKBP7Q9Y680 259 aa12□□□□□ -0.49
HDAC5-208ENST00000588419 BIRC5O15392 142 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 ZNF208O43345 1280 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 ANP32DO95626 131 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 BCHEP06276 602 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 GPIP06744 558 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 DBIP07108 87 aaKnown RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 GUSBP08236 651 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 IGHV4-31P0DP07 118 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 KITP10721 976 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 NCF2P19878 526 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 MPGP29372 298 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 SLC1A3P43003 542 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 EFNA4P52798 201 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 TUBA1BP68363 451 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 TUBA4AP68366 448 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 VLDLRP98155 873 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 LGALS3BPQ08380 585 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 SLC17A1Q14916 467 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 RPS26P11Q5JNZ5 115 aaPredicted RBP11.99□□□□□ -0.49
HDAC5-208ENST00000588419 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 NXNQ6DKJ4 435 aa11.99□□□□□ -0.49
HDAC5-208ENST00000588419 PAQR6Q6TCH4 344 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms