RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TAF8Q7Z7C8 310 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 VSIG1Q86XK7 387 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 UNC45BQ8IWX7 931 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 KLHL7Q8IXQ5 586 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF683Q8IZ20 524 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ATP6V0D2Q8N8Y2 350 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CLEC1AQ8NC01 280 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 WDR36Q8NI36 951 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 JOSD2Q8TAC2 188 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 GOLGA5Q8TBA6 731 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 NELFBQ8WX92 580 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ART4Q93070 314 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CCNL2Q96S94 520 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CCT8L2Q96SF2 557 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SLC17A9Q9BYT1 436 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ABCG8Q9H221 673 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CXXC4Q9H2H0 198 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 LRRN3Q9H3W5 708 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CUEDC2Q9H467 287 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SRD5A3Q9H8P0 318 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 VIPAS39Q9H9C1 493 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 POPDC2Q9HBU9 364 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SAMSN1Q9NSI8 373 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 RCOR3Q9P2K3 495 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ARMCX3Q9UH62 379 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CD84Q9UIB8 345 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 PSORS1C1Q9UIG5 152 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 TP53TG5Q9Y2B4 290 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 OR51B4Q9Y5P0 310 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 HELZ2Q9BYK8 2649 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 KNL1Q8NG31 2342 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 COL27A1Q8IZC6 1860 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ATP6AP2A0A1C7CYW4 349 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MAGEB16A2A368 324 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ZFP92A6NM28 416 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 EFCAB7A8K855 629 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 PES1O00541 588 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MCF2LO15068 1137 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SYT7O43581 403 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 BUB1O43683 1085 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 DFNA5O60443 496 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 RAD1O60671 282 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ALOX12BO75342 701 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ZMPSTE24O75844 475 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 FGF1P05230 155 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 LIPCP11150 499 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CTSEP14091 401 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 GLRA1P23415 457 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 F8A1P23610 371 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 OR1E1P30953 314 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CCR1P32246 355 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SOAT1P35610 550 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 RABIFP47224 123 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 DUSP3P51452 185 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CDH4P55283 916 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 GFERP55789 205 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 PFN3P60673 137 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SRP54P61011 504 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 RHOAP61586 193 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 PPP1CAP62136 330 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SNRPFP62306 86 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 RPS21P63220 83 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 GNA12Q03113 381 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MFGE8Q08431 387 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ILKQ13418 452 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 PTK6Q13882 451 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CAMK4Q16566 473 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 WSCD2Q2TBF2 565 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 NADK2Q4G0N4 442 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CARD16Q5EG05 197 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ARMC12Q5T9G4 340 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 WDR25Q64LD2 544 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CAPN13Q6MZZ7 669 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 PET117Q6UWS5 81 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CERS6Q6ZMG9 384 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ARL14Q8N4G2 192 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 ARL10Q8N8L6 244 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 DCAF4L2Q8NA75 395 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 CXorf40AQ8TE69 158 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 FAM131CQ96AQ9 280 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 BTN2A3PQ96KV6 586 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 NRTNQ99748 197 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 TSG101Q99816 390 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 DDX50Q9BQ39 737 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 C11orf70Q9BRQ4 267 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 THUMPD3Q9BV44 507 aaKnown RBP2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MAGEF1Q9HAY2 307 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 STARD5Q9NSY2 213 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SEPT10Q9P0V9 454 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SPASTQ9UBP0 616 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 LHX3Q9UBR4 397 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 TRIM10Q9UDY6 481 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SCML1Q9UN30 329 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 NEU3Q9UQ49 428 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 KCNK6Q9Y257 313 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MAST4O15021 2626 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
SCFD1-219ENST00000556413 MYO18BQ8IUG5 2567 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 IGHV5-10-1A0A0J9YXX1 117 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms