RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 C17orf53Q8N3J3 647 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 KRTCAP2Q8N6L1 136 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 CCDC63Q8NA47 563 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 FAM71CQ8NEG0 241 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 OR1K1Q8NGR3 316 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 ZNF418Q8TF45 676 aaPredicted RBP17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 MZB1Q8WU39 189 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 MOAP1Q96BY2 351 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 ZG16BQ96DA0 208 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 ZNF350Q9GZX5 532 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 NARFLQ9H6Q4 476 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM45AQ9NWC5 275 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 HIF1ANQ9NWT6 349 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 PCDHB14Q9Y5E9 798 aa17.6■□□□□ 0.41
SQSTM1-215ENST00000514093 TGP01266 2768 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 A0A096LPE4 126 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TMED7-TICAM2A0A0A6YYA0 188 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 A0A1W2PPZ6 126 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM129A0AVI4 362 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 ZC3H12DA2A288 527 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 B4DSR2 109 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 FAM157AC9JC47 383 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 EIF1BO60739 113 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 GLRA3O75311 464 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 KRT33AO76009 404 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 ERCC1P07992 297 aaPredicted RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 NPR2P20594 1047 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 FKBP2P26885 142 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 RPL3P39023 403 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 UBE2NP61088 152 aaKnown RBP17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 ATP6AP1LQ52LC2 224 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 KANK2Q63ZY3 851 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 C16orf62Q7Z3J2 963 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM99Q8N816 258 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 POMGNT2Q8NAT1 580 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 FAM216AQ8WUB2 273 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TMEM45BQ96B21 275 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 C1orf50Q9BV19 199 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TPK1Q9H3S4 243 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 OBP2BQ9NPH6 170 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 PCDHB10Q9UN67 800 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 TMED7Q9Y3B3 224 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 PKD1L1Q8TDX9 2849 aa17.59■□□□□ 0.41
SQSTM1-215ENST00000514093 DUXAA6NLW8 204 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 TMEM114B3SHH9 223 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 AP3D1O14617 1153 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 PLIN3O60664 434 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 PEX11AO75192 247 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CHEK2O96017 543 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CELA3BP08861 270 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 ADRA2AP08913 450 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CPA3P15088 417 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CREB1P16220 341 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 IL1RL1Q01638 556 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 PLAURQ03405 335 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 OTUD3Q5T2D3 398 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 TYW3Q6IPR3 259 aaKnown RBP17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 UGT2A3Q6UWM9 527 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 RNF165Q6ZSG1 346 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 MYPOPQ86VE0 399 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CARM1Q86X55 608 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 CDK20Q8IZL9 346 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 OR4F15Q8NGB8 312 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 OR9K2Q8NGE7 335 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 BCL2L2Q92843 193 aaPredicted RBP17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 DDIT4LQ96D03 193 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 COQ8BQ96D53 544 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 BOD1Q96IK1 185 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 SAP130Q9H0E3 1048 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 DYNLRB1Q9NP97 96 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 ATAD3AQ9NVI7 634 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 SLC35A3Q9Y2D2 325 aa17.58■□□□□ 0.4
SQSTM1-215ENST00000514093 TRIM77I1YAP6 450 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 PIP5K1BO14986 540 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 AKR7A3O95154 331 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 AK1P00568 194 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 ABHD2P08910 425 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 CKAP4Q07065 602 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 SHQ1Q6PI26 577 aaKnown RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 PAQR6Q6TCH4 344 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 LINGO2Q7L985 606 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 GPAT4Q86UL3 456 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 C10orf107Q8IVU9 208 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 CLECL1Q8IZS7 167 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 ARFGAP2Q8N6H7 521 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 TWIST2Q8WVJ9 160 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 TMEM186Q96B77 213 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 SLC35G5Q96KT7 338 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 ALKBH3Q96Q83 286 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 GATA5Q9BWX5 397 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 OR51I1Q9H343 314 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 PSMC3IPQ9P2W1 217 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 CRNNQ9UBG3 495 aaPredicted RBP17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 OSGIN1Q9UJX0 560 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 PCDHGB4Q9UN71 923 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 SPEF1Q9Y4P9 236 aa17.57■□□□□ 0.4
SQSTM1-215ENST00000514093 OR12D1P0DN82 309 aa17.56■□□□□ 0.4
SQSTM1-215ENST00000514093 TACR3P29371 465 aa17.56■□□□□ 0.4
SQSTM1-215ENST00000514093 SELENOPP49908 381 aa17.56■□□□□ 0.4
SQSTM1-215ENST00000514093 ETF1P62495 437 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms