RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GDPD3Q7L5L3 318 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 HPS6Q86YV9 775 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 CSNK1G2-AS1Q8NCQ2 148 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ACMSDQ8TDX5 336 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 GLYATL2Q8WU03 294 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ANKRD49Q8WVL7 239 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 ZBED6CLQ96FA7 236 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 PRRC1Q96M27 445 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 OPRPNQ99935 248 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TRIM51Q9BSJ1 452 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 MCRIP2Q9BUT9 160 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 STMN4Q9H169 189 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 BLZF1Q9H2G9 400 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RBKSQ9H477 322 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 SPRR3Q9UBC9 169 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 TBC1D24Q9ULP9 559 aa3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 RPL36Q9Y3U8 105 aaKnown RBP3.1□□□□□ -1.91
TRAPPC13-208ENST00000505553 USP47Q96K76 1375 aa3.09□□□□□ -1.91
TRAPPC13-208ENST00000505553 A0A1B0GWB2 263 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 E9PAM4 449 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 DYNC1I1O14576 645 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TRDMT1O14717 391 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 UGT1A9O60656 530 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TOM1O60784 492 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 GPX5O75715 221 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR2J3O76001 311 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 NOL4O94818 638 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 SLC2A10O95528 541 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 PRKACAP17612 351 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 MSR1P21757 451 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 ADORA2BP29275 332 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 HMOX2P30519 316 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 CALCRP30988 508 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 VHLP40337 213 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 RPL29P47914 159 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 PPIL2Q13356 520 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR5I1Q13606 314 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 CYLC2Q14093 348 aaPredicted RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 DGUOKQ16854 277 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 ISXQ2M1V0 245 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 AADACL4Q5VUY2 407 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TWF2Q6IBS0 349 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TMEM220Q6QAJ8 160 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 C19orf35Q6ZS72 473 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 C9orf40Q8IXQ3 194 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TPRX1Q8N7U7 411 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 B3GNT7Q8NFL0 401 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 FAM110BQ8TC76 370 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 ARNTL2Q8WYA1 636 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 PSMG2Q969U7 264 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 POM121L2Q96KW2 1035 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 KCNA7Q96RP8 456 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 MCHR1Q99705 422 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 P2RY13Q9BPV8 354 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 TDRD3Q9H7E2 651 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 HEXA-AS1Q9H8Q6 139 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 PANK3Q9H999 370 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 LYARQ9NX58 379 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 THUMPD1Q9NXG2 353 aaKnown RBP3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 DPM3Q9P2X0 92 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 PLLPQ9Y342 182 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 ANKRD30BQ9BXX2 1392 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 NACADO15069 1562 aa3.09□□□□□ -1.92
TRAPPC13-208ENST00000505553 CC2D2AQ9P2K1 1620 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 INSRP06213 1382 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 SMCO2A6NFE2 343 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR5B21A6NL26 309 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 VSTM2BA6NLU5 285 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 IFITM10A6NMD0 228 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 DLGAP1O14490 977 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 HSD17B6O14756 317 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 LATO43561 262 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 CHMP2AO43633 222 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 NEMFO60524 1076 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 LGI1O95970 557 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 PLEKP08567 350 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 MELTFP08582 738 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 ZNF853P0CG23 659 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 GATA1P15976 413 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 GTF2E2P29084 291 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 ATP5C1P36542 298 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 NUP62P37198 522 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 DDOSTP39656 456 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 PTGDSP41222 190 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 YAP1P46937 504 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 SLC11A1P49279 550 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 CSNK1EP49674 416 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 KPNA2P52292 529 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 HMGCS2P54868 508 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 CARD18P57730 90 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 HILS1P60008 231 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 RAB10P61026 200 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 TLE4Q04727 773 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 GRB7Q14451 532 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 ARL6IP1Q15041 203 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 NKAIN1Q4KMZ8 207 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 NHLRC3Q5JS37 347 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 SAMD4BQ5PRF9 694 aaKnown RBP3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 C9orf135Q5VTT2 229 aa3.08□□□□□ -1.92
TRAPPC13-208ENST00000505553 OR5M10Q6IEU7 315 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms